Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeh_1355 |
Symbol | |
ID | 3888866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-C |
Kingdom | Bacteria |
Replicon accession | NC_007760 |
Strand | - |
Start bp | 1561976 |
End bp | 1562674 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 637862884 |
Product | sigma 28 (flagella/sporulation) |
Protein accession | YP_464566 |
Protein GI | 86157781 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000951359 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGCCG CACACGCCGC CGTCGCCCGC TACGGCCCGC CCGCCCCCGA GCCGGACGAG GCCCTGCTCC GGCGGCACGC GACGCTGCTC GACCGCTGCG CCCGGCGCCT CGCCGCCCGC ACCGGCCACG CGGTCGAGCC GGGCGATCTC TGGTCCGCCG GCGCCATGGG CCTGCTCGAG GCGGCGCGGC GCTACGACGC GTCCCAGGAC GTCCGCTTCG AGACGTTCGC GGAGCACCGG GTGCGCGGCG CCATGCTGGA CGAGCTGCGG CGGATGGACC ACCTGCCGAG GCGCCTCCGC GCGGACGCCG ACCGGGTCCT CGCGGCCCGG GCGCGGCTGG AGCAGGCCCT CGGCCGCGAG CCGGACCCGG TCGAGATCGC CGAGGCGGCG GGGCTCCCGG CCGAGCAGGT CGGGGAGCTG CTCCTGCTCG CGTCGCCGCC GGTGCCGGTC GAGGACGACG TCGCGCCCGC CCCGGCCGTG CCCGCGGACG AGGCGCTCGG GGCGGCCGAG CGAAGGGGCG CGCTGGCCCG CGCGGTGGCG GCGCTGCCGG AGCGGCTGCA GGTGCTGCTG GCGCTCTACT ACGACGAGGC GCTCACCTAC CGCGAGATCG CGAAGGTGCT GGGCGTGTCC GAGCCGCGCG TCTGCCAGCT CCACTCCGAG GCGGCGAAGA GGCTCCGCGC GCTCATGTCG GAGGCTTGA
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Protein sequence | MHAAHAAVAR YGPPAPEPDE ALLRRHATLL DRCARRLAAR TGHAVEPGDL WSAGAMGLLE AARRYDASQD VRFETFAEHR VRGAMLDELR RMDHLPRRLR ADADRVLAAR ARLEQALGRE PDPVEIAEAA GLPAEQVGEL LLLASPPVPV EDDVAPAPAV PADEALGAAE RRGALARAVA ALPERLQVLL ALYYDEALTY REIAKVLGVS EPRVCQLHSE AAKRLRALMS EA
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