Gene Adeh_1079 details

Gene Information

• Locus tag: Adeh_1079
• ID: 3887026
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaeromyxobacter dehalogenans 2CP-C
• Kingdom: Bacteria
• Replicon accession: NC_007760
• Strand: +
• Start bp: 1246351
• End bp: 1248318
• Gene Length: 1968 bp
• Protein Length: 655 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 637862602
• Product: hypothetical protein
• Protein accession: YP_464291
• Protein GI: 86157506
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG4591] ABC-type transport system, involved in lipoprotein release, permease component
• TIGRFAM ID: [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTCCGATC CCGTCCCGCA CCGGCCCGGC TCCGAGCCCG GCCATCGCCC GGCGGCGCCC 
GCGCCCGGCG CGGCCCCCCG CGACGGCGCC GCGCACCCCG TGCCGCCCGT CTTCTCCTTC 
GCCGCGTTCG CGCTGGTGCT GGCCGGCGTG TTCGGCGCGG CCGCGCTCGC GCCGGTGGCC 
CACGCCTTCT TCGGCGACCG GCTGGGCCTG CCCACGCCGC TCGCCAGCGG CCTGGCCGCG 
CTCGCCGGCG CCTCGCTCGG CGGCGCGTTC GGCGCCGCCG CCGCGCGGGT GGGGCGCCGC 
CTCGCGTTCT ACGAGCTCTC CGCCGCCACG CTGCTGTGGA CCGCGGTGGT CGCGGTGCTG 
GTGGGCGTGC TGCCCCCCGG CGTCCGCGGC GCGGTGGGCG CGATCCAGGC GCTCGAGGCC 
CAGGGCACGC TGGTGGTGGT GCTCGGGCTG CTCGGGGCCG GCCTGCTCTC GGCGGTGGCG 
GTGTTCGCGG GCGCCAGCCT CGCGTACCTG CTGGCGGGCG CGGGCCGGGT GGACGCCTCG 
CTCTCCTACG AGCTGTTCGT GGCGCGCAGC CACCTGAAGC TCTCGCCGAA GGCGCTCGCG 
GCGCTGTTCG CGGTGGTGGT GACCGGGCTG CTGCCGGGCC TGCTCCTCGC GCTCGCCTGG 
TCCCTCGTGC GCGACGCGCG GGAGCGGCGC GCCTACCGCC GCGGCGAGCT GTTCCACCGC 
CCGCGCATGC CGGCCACGCT GCTCATGACG CTCATCTCGA TCGGCGGCGT CGCCATCGGC 
GTCTGGGCGC TCACCGTGGT GCTGTCGGTG ATGAGCGGCT TCGAGGCCGA CCTGAAGAAG 
AAGATCCTGG GCCACACCGC GCACGGCATG GTGCTGAGCT ACGGGCAGGA CGACTTCGGC 
GACTGGCGCC GCATCCGCGA GACGGTGCTG GGGGTGCGCG GCGTCGAGGC GGCCACGCCG 
TTCCTCTACA ACGAGGTGAT GCTCTCCACC GGCCAGAACC TGACCGGCGC GATCCTGAAG 
GGCATCGACG TGAAGACCAT CGGGTCGGTC ACCGACCTGC CCGCGAGCGT GCAGGACGGC 
CGGCTGGAGT GGCTGGACGC GCCGGCGGAG ATCCCGCTGC CCCGCGACGG CGGCGAGGCC 
GGGGGCGCGG CGCCGGAGCG GCCGCGCCCG GGCCGCCCGC TGCCGGGCAT CGTGATCGGG 
CGCGAGCTGG CGCACGCGCT CCGGGTCTTC GTGGGCGACC AGGTCAACCT GGTCTCCCCG 
TTCGGCGACC TGGGCCCGGG CGGGCCGCAG CCGAAGAGCC GGCCGTTCCG CGTGGCGGCG 
GTGTTCTACA GCGGCATGTA CGAGTACGAC TCCAAGTTCG CGTACATCTC GCTCGCCGAG 
GCGCAGCGGT TCTTCGGCGT GGAGACGGTC ACCGGGCTCG AGGTGAAGGT GCGCGACGCG 
GACGCGGCGC GCTCGGTCAT GGGCCGGGTG GTGTTCGCGC TGGGCGGCTG GCCGTACCGC 
GCCAAGGACT GGGGCGAGCT GAACCGCAGC CTCTTCTCCG CGCTGCAGAT GGAGAAGGTG 
GTGATGGCGG TGATCCTCGG CTTCATCGTG CTGGTGGCGA GCTTCATCAT CGTCGCCACG 
CTCATCATGC AGGTGCTGGA GAAGCGGCGG GAGATCGCGG TGCTGAAGTC CATGGGCGCC 
GGGGTGCCCA GCGTGATGAA GATCTTCGTG GTGGAGGGCG TGGTGATCGG TGCGGTGGGC 
ACGGTCTTCG GCCTGCTGCT CGGGCTCGGC ACCTGCCTGC TCATCGACAA GGTCGGCATC 
CCGCTCGACC CGGGCGTCTA CTACATCTCC AACCTGCCGG TGCTGCTCGA CGGCGCGCAG 
TTCACGCTGG TGGGCCTGGC CGCGCTCGCG CTCTCCTACC TCGCCACCAT CTACCCCGCC 
ACCAAGGCGG CCCGCCTCCA CCCGGTGGAC GGGCTGCGGG ACGAGTGA 

 

Protein sequence

MSDPVPHRPG SEPGHRPAAP APGAAPRDGA AHPVPPVFSF AAFALVLAGV FGAAALAPVA 
HAFFGDRLGL PTPLASGLAA LAGASLGGAF GAAAARVGRR LAFYELSAAT LLWTAVVAVL 
VGVLPPGVRG AVGAIQALEA QGTLVVVLGL LGAGLLSAVA VFAGASLAYL LAGAGRVDAS 
LSYELFVARS HLKLSPKALA ALFAVVVTGL LPGLLLALAW SLVRDARERR AYRRGELFHR 
PRMPATLLMT LISIGGVAIG VWALTVVLSV MSGFEADLKK KILGHTAHGM VLSYGQDDFG 
DWRRIRETVL GVRGVEAATP FLYNEVMLST GQNLTGAILK GIDVKTIGSV TDLPASVQDG 
RLEWLDAPAE IPLPRDGGEA GGAAPERPRP GRPLPGIVIG RELAHALRVF VGDQVNLVSP 
FGDLGPGGPQ PKSRPFRVAA VFYSGMYEYD SKFAYISLAE AQRFFGVETV TGLEVKVRDA 
DAARSVMGRV VFALGGWPYR AKDWGELNRS LFSALQMEKV VMAVILGFIV LVASFIIVAT 
LIMQVLEKRR EIAVLKSMGA GVPSVMKIFV VEGVVIGAVG TVFGLLLGLG TCLLIDKVGI 
PLDPGVYYIS NLPVLLDGAQ FTLVGLAALA LSYLATIYPA TKAARLHPVD GLRDE