Gene Adeh_1018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAdeh_1018 
Symbol 
ID3888481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-C 
KingdomBacteria 
Replicon accessionNC_007760 
Strand
Start bp1175261 
End bp1176484 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content79% 
IMG OID637862540 
Productouter membrane efflux protein 
Protein accessionYP_464230 
Protein GI86157445 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCTGCAC ATCGTCGATG GGCGTGCGCG CTCGTGCTCG CGTACGGGGC GCCCGCGCTC 
GCGCAGGAGG CCACGCCGGC CCTGGCCGCA CTCCGCTGGG CGGACGTCAC CGCCGCGCTC
GAGCGCGATC CGCGCCTCGC GGCGTCGCGG TCGCGCATCC GCTCGGCGGA GGGCGCGCTC
ACGGCGGCAC GCACGCCGCC GAACCCCGAG GTCGAGGCGA CCGCCGGCCG CGCCGAGGCG
CGGGACGGGG CGCTGCGCCG GAACGAGTGG GGCCTCGCGC TCACCATCCC GCTCGACTGG
CTCGCGAGGC GTGGACCCGA GGTGGACGCC GCCCGCGCGA CGGTGGACGA GGCCGCGGAG
GAGGCCCGTG AGCTCCGCGC CGAGGTCACG GCGGAGCTGT GGCGGCTGTA CGTCGGGGCC
GCGTACGCGC AGGCCGAGGC GGAGACGCTC GAGGCCACGG AGCGGCAGGC CGACGCGCTC
GCGCGCCTCG TCCGCCGGCG CGTCGAGGCG GGGGAGGGGC GGCCGGTCGA GATCCCGCGG
GTGGAGCTCG AGCTCGAGCG CGTCAGGAAC CAGGTCGACG CGGCGCGCGC GGCGCGAGAC
GGCGCGCTCG CGCAGCTCGG GGCGTGGCTG GCCGTCCCGG TGCAGCGGGT GGAGCCTCCG
CCGCCCCCCC CGCCGCTCGA CCCGGGCAGC CCGATGCTCG ACGCGTCCAG GCACCCGCGG
GTGCGCGCCG CGCTGGCGCG CGCCGAGGCG GCCCGGGCGG AGGCCTCCCT GGCGCGGCGG
TCCCGCGTCC CCGCGCTCTC GGTGGGAGGC TTCTACACGA GCGAGCTCGA TCGCGAGGCG
GTGGGCGGGC GCGTCGGGGT CGAGCTGCCG CTGTGGGACT GGAAGTCCGG ACGCGTCCGT
CGCGCCGAGG CCGCCGCCGC CGCGGAGGCG AGCCGCGCCG ACGCCGAGGG GCGTGCCCTC
GCCGCGGCGC ACGCGGACGC CGTCGCCACG TGCGGAAAGG CCCGGGCGAT CGCGGACCGC
CAGACGACCC GGATCCTGCC TCGCGCCGAG GAGTCGGCGC GCACGCTCGA GCGGACGTTC
GAGCTCGGCG AGACGGGGAT CCTCGACGTC ATCGACGCGC GGCGCGTGCT CCTCGAGGCG
CGCCGCGAAT ACCTCTCCAG CGCCCGCGAG CGAGACGTGG ACTGCGGCGC GCTCATCCTG
CTGTCCGGTC GGGAGCTGCC GTGA
 
Protein sequence
MSAHRRWACA LVLAYGAPAL AQEATPALAA LRWADVTAAL ERDPRLAASR SRIRSAEGAL 
TAARTPPNPE VEATAGRAEA RDGALRRNEW GLALTIPLDW LARRGPEVDA ARATVDEAAE
EARELRAEVT AELWRLYVGA AYAQAEAETL EATERQADAL ARLVRRRVEA GEGRPVEIPR
VELELERVRN QVDAARAARD GALAQLGAWL AVPVQRVEPP PPPPPLDPGS PMLDASRHPR
VRAALARAEA ARAEASLARR SRVPALSVGG FYTSELDREA VGGRVGVELP LWDWKSGRVR
RAEAAAAAEA SRADAEGRAL AAAHADAVAT CGKARAIADR QTTRILPRAE ESARTLERTF
ELGETGILDV IDARRVLLEA RREYLSSARE RDVDCGALIL LSGRELP