| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_0703 |
|---|
| Symbol | |
|---|
| ID | 3886823 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | - |
|---|
| Start bp | 819686 |
|---|
| End bp | 820363 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 637862224 |
|---|
| Product | type III secretion system protein |
|---|
| Protein accession | YP_463916 |
|---|
| Protein GI | 86157131 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4790] Type III secretory pathway, component EscR |
|---|
| TIGRFAM ID | [TIGR01102] type III secretion apparatus protein, YscR/HrcR family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00859025 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCGCCT TCGCCCTCGT CCCGTCCGCG GGCCCGGTGG CCGACCGGCC CGCCGAGATG
CTGGTGCTGC TCGCGCTGCT CGCGCTCGTG CCCGCGGCGC TGGTGATGCT GACCTCGTTC
CTCAAGATCT CGGTGGTCCT GTCGATCGCG CGCTCCGCCC TGGGCGCGCC GCAGGTGCCG
CCCAACACGG TCGTCACGGG CCTCGCGCTG GTGCTGACGC TGCTGGTGAT GGCGCCGGTG
GCGGAGCGGG CCGCCGCCCT GGCGCGGCCC GCGCCCGGCG AGCGCGGGCT CCCGGCCACG
CTGGCCGCCC TGCAGCGCGG CGCCGGGCCG GTGAAGGCGT TCCTCGCCCG CTTCGCGCGC
CCCGACGACC GGGCGGCGTT CCTCGACGTC GCGCGGCGGC TCCGCGCGCC GGACGCCGCC
GCCCCCGCCG ACGACGACCT GGCGGTGCTC GCGCCCGCGT TCGTGGTGTC GGAGCTGCGC
CGGGCCTTCA CCATCGGCTT CCTGGTGTTC GTGCCGTTCC TGGTGGTGGA CCTGGTGATC
TCGAACGTGC TGCTCGCGCT CGGCCTCACC CAGCTCTCGC CCACCTCGGT CGCGCTCCCG
TTCAAGCTGC TCCTCTTCGT CGCCGTGGAC GGGTGGAAGC TCCTCGCCCG CGCGCTGGCG
CTCTCGTACG CAGGGTGA
|
|---|
| Protein sequence | MIAFALVPSA GPVADRPAEM LVLLALLALV PAALVMLTSF LKISVVLSIA RSALGAPQVP
PNTVVTGLAL VLTLLVMAPV AERAAALARP APGERGLPAT LAALQRGAGP VKAFLARFAR
PDDRAAFLDV ARRLRAPDAA APADDDLAVL APAFVVSELR RAFTIGFLVF VPFLVVDLVI
SNVLLALGLT QLSPTSVALP FKLLLFVAVD GWKLLARALA LSYAG
|
|---|
| |