| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_0678 |
|---|
| Symbol | |
|---|
| ID | 3889485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | - |
|---|
| Start bp | 787306 |
|---|
| End bp | 788940 |
|---|
| Gene Length | 1635 bp |
|---|
| Protein Length | 544 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 637862199 |
|---|
| Product | fimbrial assembly protein |
|---|
| Protein accession | YP_463891 |
|---|
| Protein GI | 86157106 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
|---|
| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM
[TIGR01709] general secretion pathway protein L |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.333732 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCAGC ACATCCTCGG CCTCGACCTG GGCGCGCACG CGGTGAAGGC CGTGCTCCTG
GAGAGCACCT ACCGCGGCTA CGCCGTGCTC GGGGCCGCCA GCGCGCCGCT CCCCGCAGCG
GAGGGCGACG ACGCGCCGCC GCTGCTGGCG CGGCAGGCGG CCGCCGTCCA CCAGCTGCTG
GAGGAGCGCG GGTGGCGGGT GGACGAGTCG GTGGTGGGGT TCCCCGGCTC GTCCGTCTCC
TCGAACGTGG TGACGCTCCC GTTCACCGAC GCGCGCCGCA TCGAGCAGAC CATCGGGTTC
GAGGTGGAGG GGCAGATCCC CTTCGACCTC GCGTCGGTCG CGTGGGACTG GCAGCCGCTC
GGCGTGCGCG ACGGCAAGAC CGACCTGCTG GTGGGCGTGG TGCGCAAGGA GGAGCTGGGC
GCGCTGCTCG CCGCGCTCGG CCACGGCGGC CTCGACCCGC GCGCGGTGAT CCCCGCCGGC
CCCGCCTACG CGGCGCTGCT GGCGGGCGGG GCGGTGGAGC CGCTCCCGGC GCCGGCCGGG
GGACCCGCGC CGGCGGAGGG CGTGCTCGAC GTCGGCGCCG AGCGCACCAG CCTGTGCGTC
ACCGTGGCCG GCGCCTGCGA GGCGGCCCGG ACGTTCGCGT TCGGCGGCGC GCACCTGGCG
CGCGCGCTGG CGCGGGCGCT CGGGATCGCC GAGGCGGACG CGGGCGCGCT CCTCGCCGGC
GAGCTGGGCG GCCCCCCGCC GCCGCCGGAG CTGGCGGCGA AGGCGCGGGA CCCGCGGGCC
TCGGCGGCGC TCTCCGCGGC GCTGCAGCCG CTCGTGCGCG AGGTGCGCGC CACGCTGCGC
GCCTGGCAGG CGCGGGTGGG GCCGCGGCGC CTGGAGCGCC TCGCGCTGGC GGGCGAGCTG
GCCGCGCTGC CGGGCCTCCC GGAGCTGCTC GCGCCGGACG TGGACGGCCC GGTGGTGCCG
CTGGCGCTGG CCGGGCCGGC CGCGGCCTCG GTCCCCGCCG ACCGCGCCCC GGGGCTGGCG
CTGGCGCTGG CGCTCGCGCT CCGCGGCCAC CAGGGGGCGC GCGCGCCGCG CCTGAACCTG
CGCCGCGGCG AGCTCGCGTA CACCCGCGAC TTCGAGCACC TCAAGGGCAA GCTGGCGCGG
CTCGGCCTGT ACGCGGCGGC CATCCTGGTG CTGGCGGTGG TGAGCGCCGG GGTGAAGGTG
TTCGCGCTCT CGCGCCAGGA GGCGTCCCTC GACCGGGCGC TCTGCGACGC GGAGCAGAAG
ATCCTGGGCC GCTGCTACGC GAACTTCGAG GAGGCGCAGG CGATCCTGCG CGGGCGCGGC
ACCGCGGCGG CGGCGCTGCC GCGGGTCTCG GCCGTGGACG TGCTGGCCGA GCTGGCCGAC
AAGGTGCCGG CGGAGGTCCC GGTGCGGTTC GACCGCATCG AGATCACCCG CGACAAGCTG
CACCTGGAGG GCACCACCGA CGGCGCCGAG AGCGTGGACA AGGTCGTCGA GGGGCTGCGC
GGCTCGCGCT GCTTCGGCGA CGCCCGCTCC GGCAGCGCCC GCAAGCGCGC CTCCGACGGC
AAGTTCGAGT TCTCCATCGA CTCCGGGCTG ACCTGCCTCG AGTCCGGCCC GCGCGACGCG
GGCGAGAGGG GCTGA
|
|---|
| Protein sequence | MAQHILGLDL GAHAVKAVLL ESTYRGYAVL GAASAPLPAA EGDDAPPLLA RQAAAVHQLL
EERGWRVDES VVGFPGSSVS SNVVTLPFTD ARRIEQTIGF EVEGQIPFDL ASVAWDWQPL
GVRDGKTDLL VGVVRKEELG ALLAALGHGG LDPRAVIPAG PAYAALLAGG AVEPLPAPAG
GPAPAEGVLD VGAERTSLCV TVAGACEAAR TFAFGGAHLA RALARALGIA EADAGALLAG
ELGGPPPPPE LAAKARDPRA SAALSAALQP LVREVRATLR AWQARVGPRR LERLALAGEL
AALPGLPELL APDVDGPVVP LALAGPAAAS VPADRAPGLA LALALALRGH QGARAPRLNL
RRGELAYTRD FEHLKGKLAR LGLYAAAILV LAVVSAGVKV FALSRQEASL DRALCDAEQK
ILGRCYANFE EAQAILRGRG TAAAALPRVS AVDVLAELAD KVPAEVPVRF DRIEITRDKL
HLEGTTDGAE SVDKVVEGLR GSRCFGDARS GSARKRASDG KFEFSIDSGL TCLESGPRDA
GERG
|
|---|
| |