| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_0427 |
|---|
| Symbol | |
|---|
| ID | 3886316 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | + |
|---|
| Start bp | 506049 |
|---|
| End bp | 507416 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 637861945 |
|---|
| Product | outer membrane efflux protein |
|---|
| Protein accession | YP_463640 |
|---|
| Protein GI | 86156855 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.410338 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCAC TGATCACCGC GGCGCTGGCG CTGGCGCTGG CGCAGGCACC CGAGACCCCT
TCGACGCCCA CGTCCCCGCC CGCGCCCGAG GGCGCGCCGG CCGCCGCCCC CGGGCAGCCC
GCGCCGGGCG CGCTGCCCGT GCTCACGCTC GACGACGCGC TCGCCACCGC CGCCGCGCAG
AACCTGGATC TCAAGGCCGC GCAGGCGCGG CTGCGCCAGG CGGACGAGCT CTCCTGGAAG
GCGTGGTCGG GCTACCTGCC GCAGGTCACC GCCAGCGGCA CCTACACGCG CAACGAGACC
GAGGCGGTCC TGCCGGCCGG CTCGCTCGGG CCCGGCTCGC CGAAGATCAC CATCCAGGCG
CAGGACCAGC TGAACGGGCT CGTCGAGGCG ACGCAGGCGC TGCTCGCGCC GCAGCTCCTC
TTCGCCATCC CCAACGCGAA CCGCGGCGAG GAGATCGCCC GGCTGAACGT GGAGACGGCG
CGGCGCGAGG TGCTGTTCGG CGTGGCGCAG GCGTACTACG GCGCGGCGTC GCTGCGGCGG
GCCATGGAGG TGTCCGAGCG GCTGCTCGAG ATCGCGGCGC GGCAGGAGAA GGACGCGCGC
GTGCGCTACC AGGCCGGCGC CATCGCGAAG GTGGGCCTGC TGCGCGCCGA GATCGACCGG
GCCCGCGCCG AGCAGGACGT GAAGCGCTCG CAGAACGCGT TCGCCTCCGC GCGCATCGCG
CTCGCGACGC TGCTCGACCG GCGGCCGGAC TTCGACGTGG TCGATCCGCC CGAGCCGGTG
CTGGCCGGCG ACGCGGACGC GCTGGTCGCG GCGGCGCTGC GGGACCGGCC CGACGTGCAG
GCGGCGCGCG TGAACGTGGA GCTGCAGCGC GGCGTCCGGA ACCAGGCGGT GGCGCGCTAC
CTGCCCAACC TGGGCGCGTT CGGCCGCTAC ACGCTGGCGA ACGAGGCCGG CTTCACCGGC
ACGAACCACG CCTGGGCCGC CGGCCTGGCG CTGCAGTGGA AGGTGCTCGA CGGCGGCCTG
CGCGAGTCGG ACATCCGCGA GGCGAACGCG AAGATCGACG AGGCGAACGC GTCGAGCGCG
AGCGCCGAGC TGAAGGCGCG GCAGGAGGTG GAGCAGGCCT ACCTCGACAT GGAGAGCGCC
CGCGCCAACG CCGCCAAGGC GAAGGAGCAG CGCGACCTCG CCGCGGAGAA CCAGCGCCTG
GTGGACGTCG CCTTCCGGGC CGGCACCGCC ACCGCGGTGG AGCAGGCGGA CGCGACCGCC
CAGCTCCGCA CCGCGGAGGT CGGCCAGATC ACCGAGTCGC TCACCGCCCA GCTCGCGGCG
CTGCGGGTGC TGAAGGCGGC CGGCGCGTTC CACCCGACCC GGCGGTAG
|
|---|
| Protein sequence | MNALITAALA LALAQAPETP STPTSPPAPE GAPAAAPGQP APGALPVLTL DDALATAAAQ
NLDLKAAQAR LRQADELSWK AWSGYLPQVT ASGTYTRNET EAVLPAGSLG PGSPKITIQA
QDQLNGLVEA TQALLAPQLL FAIPNANRGE EIARLNVETA RREVLFGVAQ AYYGAASLRR
AMEVSERLLE IAARQEKDAR VRYQAGAIAK VGLLRAEIDR ARAEQDVKRS QNAFASARIA
LATLLDRRPD FDVVDPPEPV LAGDADALVA AALRDRPDVQ AARVNVELQR GVRNQAVARY
LPNLGAFGRY TLANEAGFTG TNHAWAAGLA LQWKVLDGGL RESDIREANA KIDEANASSA
SAELKARQEV EQAYLDMESA RANAAKAKEQ RDLAAENQRL VDVAFRAGTA TAVEQADATA
QLRTAEVGQI TESLTAQLAA LRVLKAAGAF HPTRR
|
|---|
| |