Gene Adeh_0296 details

Gene Information

• Locus tag: Adeh_0296
• ID: 3886280
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaeromyxobacter dehalogenans 2CP-C
• Kingdom: Bacteria
• Replicon accession: NC_007760
• Strand: +
• Start bp: 344867
• End bp: 345460
• Gene Length: 594 bp
• Protein Length: 197 aa
• Translation table: 11
• GC content: 77%
• IMG OID: 637861813
• Product: tRNA-(MS(2)IO(6)A)-hydroxylase-like
• Protein accession: YP_463509
• Protein GI: 86156724
• COG category: [F] Nucleotide transport and metabolism; [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG4445] Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00711968
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATCGCGT ACACTGCGCG CGTGCGCCTG CTCCGCTCGC CCACCGACCC GCGCTGGACC 
GCCGTCGCGC TCGCCGAGCT GGACCGCACG CTGCAGGACC ACGCGCATTG CGAGAAGAAG 
GCGGCGGCGA GCGCGCTGAA GCTGGTGGCC GATCACCCCG AGCGCGCCGC GATGGTGCGG 
GCGCTCGCGA AGCTCGCGCA GGAGGAGCTG CAGCACTTCC TGGCGGTGCT GGCCGAGCTG 
GGCCGGCGGG GCACGGCGCT GCCGCCCGAC GAGGGCGATC CGTACGCGCA GGCGCTCCTG 
CGCCACGTGC GCGGCGGCCC GCGGCCCGAG GACCGGCTGG TCGATCGGCT GCTGGTGGGC 
GCGCTCATCG AGGCGCGGAG CTGCGAACGC CTGTCGCTGC TCGCCGGCGC GCTTCCGGAC 
CCGCGGCTGC GGGAGCTGTA CGCGCGGCTG GCGCAGTCGG AGGCCGGCCA CGAGCGGCTG 
TTCGTGGACC TGGCGCGCGA GGTGGACCCC GCCGCCGACG CGCGGCTCGA GGCGCTCGCC 
GCGGAGGAGG CGCGGGTGGT GGCGGCCCTG CCGCTCCTGC CCCGCATCCA CTGA 

 

Protein sequence

MIAYTARVRL LRSPTDPRWT AVALAELDRT LQDHAHCEKK AAASALKLVA DHPERAAMVR 
ALAKLAQEEL QHFLAVLAEL GRRGTALPPD EGDPYAQALL RHVRGGPRPE DRLVDRLLVG 
ALIEARSCER LSLLAGALPD PRLRELYARL AQSEAGHERL FVDLAREVDP AADARLEALA 
AEEARVVAAL PLLPRIH