| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_0253 |
|---|
| Symbol | |
|---|
| ID | 3886080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | - |
|---|
| Start bp | 296293 |
|---|
| End bp | 297468 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 637861770 |
|---|
| Product | 2-nitropropane dioxygenase, NPD |
|---|
| Protein accession | YP_463466 |
|---|
| Protein GI | 86156681 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCG ACGCGACCCC CGTTCACACC GAGGAAACCG CCGCGCCGTT CCCGCGCCTC
GACCGCGCGG CGATCGAAGC GCTCGTGCGC GCCGGCAAGC GCCTGCTGGT GCAGGGCGGG
ATGGGCATCC ACGCCTCCGA CGGCCTCGCC GGCAAGGTGG CGCGCCACCG CGGCGACCGG
CTGGTGGGCG TCGGCACCAT CTCGGCGGTG CTGAAGACCC CCGAGCAGCT CCGCGCCGAG
ATCCGCCGCG CGCGGGCCGA GGCGCCGGGC GGCTTCGTGG GCGTCAACCT CATGGCCGCC
ATCAACAAGG ACGACTTCGA GGCGCTGGCG CGGGTGTCGA TCGAGGAGAA GGTGTCCTTC
CTCGTGCAGG GCGCCGGCAT CTCGCGCGAG ATCGTGCGCT GGTGCCGCGA GGGCGGCGTG
CCGTTCTGCG GCATCGTCTC CTCCGGGCGG CTCGCGGCCA TGTACGAGAA GTGGGGCGCG
GACTTCGTGG TGGCGGAGGG CGCCGAGGCG GGCGGCCACA TCGGCGACAT CGGCCACCCG
CTGCCCACGC TGGTGGACGA GGTGATCGCG GCGACGTCGC TGCCGGTGAT CGCGGCCGGC
GGCGTGGACG CGTCCGACGT CTCGCGCTTC CTCGCGGCCG GCGCGGCCGG CGTGCAGATG
GCGACCCGCT TCCTCGCGTG CTCGGACGGC GACGTCCACC CGGCCTTCAA GCAGATGCAC
CTCGCCAAGC GCGAGGACGA CGTGGTGATC ATCACGAGCT GCGTGAAGGG CATGAAGGCG
CGCGCGGTGC GCAACGCGTT CACCGAGCGG CTCGCCCGCG GCGAGGCGGT GCCGCCGCGC
TCCAAGCTCT GGTGGTTCGG CAAGGACGGC TACCGCGGGC GGCGGGGCTC CTGCATCCAG
TGCCTGGGCG AGGGGCTCTG CAAGGCCCGC GCGTCCGGCT TCAAGGAGAG CTTCTGCATC
ACCGACGCGC TGCTCGAGGC GGCGGTGCAC GGCGACACCG AGGCCGGGCT CTTCTACACG
GGGCAGAGCA TCACCCGGAT CGGGGAACGG GACGCGGGGC AGCTGCCGAG CGCTGGGGAG
ATCCTCGCCG ATCTGGAGCT GCGGCTGGCC GGGGAGGCGC GGCCTTCCGA CGCAGGGCCG
CAGGCCCGGC CGGACGCGGT GGGCGCGGCC GCCTGA
|
|---|
| Protein sequence | MTADATPVHT EETAAPFPRL DRAAIEALVR AGKRLLVQGG MGIHASDGLA GKVARHRGDR
LVGVGTISAV LKTPEQLRAE IRRARAEAPG GFVGVNLMAA INKDDFEALA RVSIEEKVSF
LVQGAGISRE IVRWCREGGV PFCGIVSSGR LAAMYEKWGA DFVVAEGAEA GGHIGDIGHP
LPTLVDEVIA ATSLPVIAAG GVDASDVSRF LAAGAAGVQM ATRFLACSDG DVHPAFKQMH
LAKREDDVVI ITSCVKGMKA RAVRNAFTER LARGEAVPPR SKLWWFGKDG YRGRRGSCIQ
CLGEGLCKAR ASGFKESFCI TDALLEAAVH GDTEAGLFYT GQSITRIGER DAGQLPSAGE
ILADLELRLA GEARPSDAGP QARPDAVGAA A
|
|---|
| |