Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeh_0162 |
Symbol | |
ID | 3890238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-C |
Kingdom | Bacteria |
Replicon accession | NC_007760 |
Strand | + |
Start bp | 186114 |
End bp | 187604 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 81% |
IMG OID | 637861680 |
Product | hypothetical protein |
Protein accession | YP_463376 |
Protein GI | 86156591 |
COG category | [K] Transcription |
COG ID | [COG1293] Predicted RNA-binding protein homologous to eukaryotic snRNP |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.562717 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGCTCA CCGCTCGCGA GCTCGCCCAG GTGGTCGCCG AGCTCGCCCC GCTCGCCGGG GCGTACGTCG AGGCGGTGCG CGCGCACGCG GAGCGGGCGC TCACCCTGTC GCTCCGCGGC CGCGCCGGCG ACGCGCTGCT GCTGCTCTCC GCCGAGCCCG ACGTCACCCG CCTCCACGCG GCCCGCCGCC GCCCCCCGCA GCCCGACGCC CCCTACGCCG TCCAGGCGGT GCTCCGCCGC GAGCTGGAGG GCGCGCGCCT CGCCGGCCTG GAGACGCTCC CGGGCGACCG GGTGGTGGCG CTCTCCTTCG AGCGCGCCCC GGCGCGGGGC GGGCCGGTAC GCCTGGTGGC GGAGCTCACC GGCCGGCACG GCAACCTGTT CCTGGTGGAC GCGGCCGGGA TCATCCGCGC CGCCGCCGCC CGCAACCTCT CGCAGCGCCG CGACCTCGCC GTGGGCCGGC CCTACCAGCC GCCCTCGCTC CCGCCCGCCG GCCCCGGCTC CGACGCCGGC CAGGGCGCGC CCCGGTTCGC GCCGGTGCCC GGCACGCCGT TCCCGCTCTC GGCCGCGATC GAGGACGCCT ACCTCGCGCG CGAGGAGGAG CGGCGCCTGG CCGAGGGGCG GCGGCGGCTG CGCGAGCCGG TGCGCGCGGC GCTGGCCCGG GCCGGGCGCG CGCTCGCGAA GCTCGCCGAC GAGGCGGCGC GCGTGCCGGC CGCCGAGGCG GACCGCCGCG CCGCCGACCT GCTCAAGACC CACCTGCGCG CCGTCCGGCG CGGCGCGACC GAGGTCGCGG TCACCGAGTG GACCGAGGAG GGCCCGCGCG AGGTGCGCGT GGCGGTGGAC CCGGCGCTCA CGCCCCAGGC GAACCTGGAG CGGTACTACC GGCGCTACCG CCGCATCGTG GAGAGCGCCG CCCGGGTGGA GGCCCGCGCC GCCGAGGTCC GCGCCCGCGA GGCCGCGCTG CGCGCGCTCC TCGGCCGGAT CGACGCCGCC GGCGCCGCCG ACCTGCCGCG CCTCGAGCGC GAGGCCCGCC GCCTGGCCGC CGGCCCGCGC CCGGCCGCGC CGCCGCGCCG CAAGCGCGAC GAGCCCGCGC TGCCCTACCG CACCTTCCGC TCGCTCTCCG GCGCGACGAT CCTGGTCGGG CGCGGGGCGG CCGAGAACGA CGCGCTCACG CTGCGCGTCG CCCGCGGCAA CGACCTGTGG CTGCACGCGC GCGGGCTGCC CGGCGCCCAC GTGGTGGTCC GGCTCGACAA GGCGAAGGCG CCGGACGCGG AGACGCTCGT GGACGCCGCC CACCTCGCGG TGCACTTCTC CGACGCCCGC GGCGCGCCGC AGGCCGACGT CGCCTACACC CGCGCCCGCT TCGTGAAGAA GCCGAAGGGC TCGGCGCCGG GCGCGGTCAC CTACAGCCAG GAGAAGGTCC TGCTCCTGCG CACCGAGCCC GGGCGCGTCG AGCGCCTGCT CGCCGAGGAG GAGGGCGGGC AGGGCGGCTA G
|
Protein sequence | MSLTARELAQ VVAELAPLAG AYVEAVRAHA ERALTLSLRG RAGDALLLLS AEPDVTRLHA ARRRPPQPDA PYAVQAVLRR ELEGARLAGL ETLPGDRVVA LSFERAPARG GPVRLVAELT GRHGNLFLVD AAGIIRAAAA RNLSQRRDLA VGRPYQPPSL PPAGPGSDAG QGAPRFAPVP GTPFPLSAAI EDAYLAREEE RRLAEGRRRL REPVRAALAR AGRALAKLAD EAARVPAAEA DRRAADLLKT HLRAVRRGAT EVAVTEWTEE GPREVRVAVD PALTPQANLE RYYRRYRRIV ESAARVEARA AEVRAREAAL RALLGRIDAA GAADLPRLER EARRLAAGPR PAAPPRRKRD EPALPYRTFR SLSGATILVG RGAAENDALT LRVARGNDLW LHARGLPGAH VVVRLDKAKA PDAETLVDAA HLAVHFSDAR GAPQADVAYT RARFVKKPKG SAPGAVTYSQ EKVLLLRTEP GRVERLLAEE EGGQGG
|
| |