| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_0103 |
|---|
| Symbol | |
|---|
| ID | 3886009 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | + |
|---|
| Start bp | 124186 |
|---|
| End bp | 125745 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 637861621 |
|---|
| Product | peptidase M16-like |
|---|
| Protein accession | YP_463317 |
|---|
| Protein GI | 86156532 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0612] Predicted Zn-dependent peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.968685 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGCA GCCTCCGCCT CCTCCCCGTC CTCCTCGCCG CCGCCCTCGG CTGCGCCGGC
TCGCGGCCGG CCCCCGCGCC CGCGGCGCCC CCCGCCGCGC CGCCGCAGGC CGCCGCCGCG
CCCGCCGGCG CGGATCGCAG CCAGCTCCCG GCCCTCGGCG CCGCGCCCGA GCTGCACCTC
CCGCAGCAGC GCCACTTCGC GCTCGCGAAC GGGCTGCGGG TGCGGCTGGT CGAGCACCGG
CGCCTGCCCA TCGTGGCGCT CAACCTGGTG GTGCGCGCCG GCGCGGTGAA CGACCCGGCG
CGCCTGCCGG GCCTGGCGAG CTTCACCGCC AGCATGCTCA CCGAGGGCGG CACCCGCACC
CGCACCGCCA CGCGGCTCTC GGACGAGGTC GGCTTCCTGG GCGCCTCGCT CGGCGCCGGG
GCCGGCCAGG ACGCGGCCTC GCTCTCCGGC TCGTCGCTCT CGCGGCACCT CCCGAAGCTG
CTCGACCTGT TCGCCGACGT GGCCATGAAC CCGGCGTTCC GCGCGAAGGA CTTCGCGCGC
GTCCAGGACC AGCGCAAGGT GACGCTGCTC CAGCAGCGGG ACCAGCCGGC CACCATCGCG
GGCAAGGCGT TCCTGAAGGC GTACTGGGGT GAGGGCCACC CCTACGGCCA CTACGTGCTC
GGCGACGAGG CGTCGGTGGC GGCCACCCGG CCCGCCGACC TGGCCGGGTT CCACGCGCGC
TTCTGGCGGC CCGCCAACGC CGAGCTGGTG GTGGTGGGCG ACGTCTCAGA GGCCGAGCTG
CGGCCGCTCC TCGAGCGGAC GCTCGGGAGG TGGCCGGCGG GCACCGCCGC GGCGGCCCCC
CGCGCGCCCG CGCCGGCCGC GCCGCACGTC ACGCTGCTGC TCGACAAGCC GGACGCGCCC
CAGACGCTGG TGATGCTGGG CATGCCCGGG CTGGCGCGCG CCTCGCCGGA CTACGTCGCG
GCCACGGTGG CGTTCCAGGT GCTGGGCGGC GGCATGTCGT CGCGGCTGTT CCGCACGCTC
CGCGAGGAGA AGGGCTACAC CTACGGCATG GGCGCCGGCG CCGACGCGCG CCGCCTGGGC
GGCGTGAGCA TCGTGCACGG CAACGTGAAG GCCGAGGTGA CCGGCGCCGC GCTGGGCGAC
CTCCTCGGCG AGATCCGCAA GCTGCGCGAG CAGCCGGTCG GCGACGCGGA GCTGGCCGAC
GCGCGGAACG CGCTCGTCCG CTCGCTCCCG GCCGACTTCG CCACCGTGGG CGGCATCGCC
GGCCGCGTCG CCGAGCTCGT GATCCACGGC CTCCCCGACG ACTACTGGAA CGGCTACGCC
GACGCGGTCC GGAACGTCGG CTCGGCCGAC GTGCAGCGGA TCGCCGAGCG CTACCTCGAC
CCCGCGCGCG CCACGCTGGT GCTGGTGGGC ACGCCGGCCG CGGTCCGGCC GCAGCTCGAG
GGGCTCGCCA TCGGCAAGGT CGAGGTCCGG CCGGTGCCCG GCGCCACGCC GGTGCGCGCG
CCGCCGCGGA GCCCGCGGGT GCGCACGCAG CGGGCGCCTG CCACGTCGCC CGCGCCCTAG
|
|---|
| Protein sequence | MTRSLRLLPV LLAAALGCAG SRPAPAPAAP PAAPPQAAAA PAGADRSQLP ALGAAPELHL
PQQRHFALAN GLRVRLVEHR RLPIVALNLV VRAGAVNDPA RLPGLASFTA SMLTEGGTRT
RTATRLSDEV GFLGASLGAG AGQDAASLSG SSLSRHLPKL LDLFADVAMN PAFRAKDFAR
VQDQRKVTLL QQRDQPATIA GKAFLKAYWG EGHPYGHYVL GDEASVAATR PADLAGFHAR
FWRPANAELV VVGDVSEAEL RPLLERTLGR WPAGTAAAAP RAPAPAAPHV TLLLDKPDAP
QTLVMLGMPG LARASPDYVA ATVAFQVLGG GMSSRLFRTL REEKGYTYGM GAGADARRLG
GVSIVHGNVK AEVTGAALGD LLGEIRKLRE QPVGDAELAD ARNALVRSLP ADFATVGGIA
GRVAELVIHG LPDDYWNGYA DAVRNVGSAD VQRIAERYLD PARATLVLVG TPAAVRPQLE
GLAIGKVEVR PVPGATPVRA PPRSPRVRTQ RAPATSPAP
|
|---|
| |