| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I3332 |
|---|
| Symbol | |
|---|
| ID | 3847818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | - |
|---|
| Start bp | 3794919 |
|---|
| End bp | 3796604 |
|---|
| Gene Length | 1686 bp |
|---|
| Protein Length | 561 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637842998 |
|---|
| Product | oxidoreductase, GMC family protein |
|---|
| Protein accession | YP_443824 |
|---|
| Protein GI | 83719215 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCTACCG AACGTACGCT CGAGGGCGAA TTCGATTATG TGATCGTCGG CGCCGGCACG
GCCGGCTGCG TGCTCGCGAA CCGGCTCACC GAAGATCCGG ACGTGACCGT GCTGCTGCTC
GAAGCCGGCG GCAAGGACGA CTATCACTGG ATTCACATCC CGGTCGGCTA TCTTTACTGC
ATCGGCAATC CGCGCACCGA CTGGCTCTAC AAGACCGAGC CCGAAGCGGG CCTGAACGGC
CGCGCGCTGT CGTATCCGCG CGGGCGCGTG CTGGGCGGCT CGTCTTCGAT CAACGGCATG
ATCTACATGC GCGGCCAGCG CGGCGATTAC GACGATTGGG CGCACGCGAC GGGCGACGCG
GGCTGGTCGT GGGACAGTGT GCTGCCGATC TTCAGGCGCA GCGAGCATCA CCACGCGGGC
GCGACCGACG TGCATGGCGC GGGCGGCATG TGGCGCGTCG AGAAGCAGCG GCTGCGCTGG
GAGATTCTCG AGGCGTTCTC GCAGGCCGCG CAGCAAACCG GCATTCCGGC CACCGACGAT
TTCAATCGCG GCGACAACAC GGGCGTCGGC TATTTCGAAG TCAATCAGAA GCGCGGCGTC
CGCTGGAACG CGTCGAAGGC GTTCCTGCGG CCCGCGCTTG CGCGGCCGAA TCTCACCGTG
ATCACCGGCG CGCAGGCCGA GCGGCTTGTG TTCGACGGCA AGCGCTGCGC GGGCGTCGAG
TATCTCGGCG GCGGCGCGCC TTTTCTCGCG CGTGCGCGCA TCGAAGTGCT GGTCGCGTCG
GGCGCGGTGA ATTCGCCGCA ACTGCTCGAA TTGTCCGGCA TCGGCGACGG CAGCCGGCTG
CAGGCGCTCG GCATCGGCGT TGTCGCGGAT TTGCGCGGCG TCGGCGAAAA CCTTCAGGAT
CACTTGCAGT TGCGCATGGC GTTTCGCGTG CGCGGCGTGC GTACGCTGAA CACGCTGTCC
GCGCACTGGT GGGGCAAGCT GTGGATCGGC GCGCAGTACG CGTTGATGCA GCGCGGGCCG
ATGTCGATGG CGCCGTCGCA GTTGGGCGCG TTCGCGAAAT CGGACCCGAA CGATCCGGCG
CTCACGCGGC CCGATCTCGA ATACCACGTG CAGCCGCTGT CGCTCGAGCG CTTCGGCGAG
CCGCTGCATC GCTTCAACGC GTTCACCGCG TCCGTCTGCC ATCTGCGGCC GACGTCGCGC
GGCAGCATTC ATGCGGTGTC GCCGGACCCG GCGCGCGCGC CGGCGATCGC GCCGAATTAT
CTGTCGACCG ATCACGATCG ACATGTCGCG GCGAACGCGC TGCGCCTCAC GCGCCGGATC
GCGGCGGCGC CCGCGCTCGC ACGCTATGCG CCCGAGGAAA TCCTGCCGGG CGCCCAGTAT
CTGAGCGAAG CGGAGCTGAT CGCCGCGGCG GGCGCCGTCG GCACGACGAT CTTTCATCCG
GTCGGCACGT GCCGGATGGG CCGCGCGGAC GATCCGGACG CGGTTGTCGA CAGCCGCCTG
CGCGTGCGCG GCGTGACGGG GCTGCGGATC GTCGATGCAT CGGTGATGCC GACGATCACG
TCGGGCAACA CGAACTCGCC GACGCTGATG ATCGCCGAGC GCGCGAGCGA CATGATCCGC
GCGGATCGAC GCGGCGCACC GGAGCGCGGC GCGGCCGCGA GCGTCGAGGC CGCGCTGCCG
ACGTAA
|
|---|
| Protein sequence | MATERTLEGE FDYVIVGAGT AGCVLANRLT EDPDVTVLLL EAGGKDDYHW IHIPVGYLYC
IGNPRTDWLY KTEPEAGLNG RALSYPRGRV LGGSSSINGM IYMRGQRGDY DDWAHATGDA
GWSWDSVLPI FRRSEHHHAG ATDVHGAGGM WRVEKQRLRW EILEAFSQAA QQTGIPATDD
FNRGDNTGVG YFEVNQKRGV RWNASKAFLR PALARPNLTV ITGAQAERLV FDGKRCAGVE
YLGGGAPFLA RARIEVLVAS GAVNSPQLLE LSGIGDGSRL QALGIGVVAD LRGVGENLQD
HLQLRMAFRV RGVRTLNTLS AHWWGKLWIG AQYALMQRGP MSMAPSQLGA FAKSDPNDPA
LTRPDLEYHV QPLSLERFGE PLHRFNAFTA SVCHLRPTSR GSIHAVSPDP ARAPAIAPNY
LSTDHDRHVA ANALRLTRRI AAAPALARYA PEEILPGAQY LSEAELIAAA GAVGTTIFHP
VGTCRMGRAD DPDAVVDSRL RVRGVTGLRI VDASVMPTIT SGNTNSPTLM IAERASDMIR
ADRRGAPERG AAASVEAALP T
|
|---|
| |