| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I3260 |
|---|
| Symbol | |
|---|
| ID | 3847573 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | + |
|---|
| Start bp | 3719191 |
|---|
| End bp | 3721737 |
|---|
| Gene Length | 2547 bp |
|---|
| Protein Length | 848 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637842926 |
|---|
| Product | ATP-dependent DNA helicase Rep |
|---|
| Protein accession | YP_443754 |
|---|
| Protein GI | 83719895 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | [TIGR01074] ATP-dependent DNA helicase Rep |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.807902 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGACG GCGACGAGCA GGAGAATCGG ACCGGCGACG ACCGGCAGCC CGGCGAGCCA
GCCCGCGATC GATGGCCCCC ACCATCTGCC CGACATCGAC ACAAGCAGCA GGAACAGCGG
GACCAGCGTG AGCTTCAGCG CGAGCATCGC GGGACGTCCG GTAAAAAGGC GATGCTATCA
GAACGCCTCG CGACGCGAAG ACGCGCAGCG GCCATGCCGC ATGCGTGCGT CACGTCGCCG
GCAGACGCCC CTGCCGCACG AGCGCCCGGC GCGCATCGGC CGAATGGCCG ACGCGGCCGT
CGTTTCACAT ACGCGAAAGA ATCGCCGGCC GCCGCCGTGT TAACATGCGC GTCCCGCGAG
CCATTTGCCG CGGCCGGCGC CGCCTTGCGC GCGCCGGCCG CGCTTCGCTC GCGGCGCCTT
CCGGCTTCGC CGCCGTCAAC CGCAACACCA TCCGCAATCA TGTCCGCAGG CCTGAATCCC
GCTCAAAGCG AAGCGGTGCG CTATCTCGAC GGTCCCTGCC TCGTGCTCGC CGGCGCGGGC
AGCGGCAAGA CCCGCGTCAT CACGCAGAAG ATCGCGCACC TGATCGAAGC AAAAGGCTTC
GAGCCGCGCC ACATCGCCGC CGTCACGTTC ACGAACAAGG CGGCCGCCGA AATGCGCGAG
CGCGTCGGCA AGCTTCTCGA GGGCAAGACG CTCACGACGC CCGGCAAGGA AGGCCGCAAG
GTGCCCGTCA ATCAGCTCAC CGTCTGCACG TTCCATTCGC TCGGCGTGCA GATCCTGAGA
CAGGAGGCCG AGCACGTCGG CCTGAAGCCG CAGTTCTCGA TCATGGATTC GGACGACTGC
TTCGGGATGA TCCAAGAGCA GATCGGCACG ACCGACAAGG GCCTGATCCG CAAGATCCAG
ACGATCATCT CGCTGTGGAA GAACGGCCTC GTCACGCCCG AGGAGGCGAT GACGATCGCG
GCGAACGAGG ACGAGCACCA GGCGGCGCTC GTCTACCGGA ACTACGTCGC GACGCTGCAC
GCGTACCAGG CGGTCGACTT CGACGATCTG ATCCGCCTGC CGACCGAGCT GTTCGCGAAG
AACGAGCCGG TGCGCGACCG TTGGCAGAAC CGGCTGCGCT ACCTGCTGAT CGACGAATAC
CAGGACACCA ACGCGTGCCA GTACGAACTG CTCAAGCTGC TCGCGGGGCC GCGAGCGGCG
TTCACGGCGG TGGGCGACGA CGATCAGGCG ATCTACGGCT GGCGTGGAGC TACGCTCGAG
AATCTCGCGC AACTCGGCAA GGATTTTCCG AAGCTGCACG TGATCAAGCT CGAGCAGAAC
TATCGCTCGA CGGTGCGCAT TCTGACGGCG GCGAACAACG TGATCGCGAA CAACCCGAAG
CTGTTCGAGA AGAAGCTGTG GTCCGAGCAC GGGATGGGCG ATTCGATCAC CGTCACGCCG
TGCAACGACG AAGAGCACGA GGCCGAATCC GTCGTGTTCC GCCTGTCGGC GCACAAATTC
GAGCGGCGCA CCCAGTTTCG CGACTACGCG ATCCTGTACC GCGGCAACTT CCAGGCGCGC
ATCTTCGAGC AAGTGCTGCG GCGCGAGCGG ATTCCATACG TGCTGTCGGG CGGCCAGTCG
TTCTTCGACA AGGCCGAGAT CAAGGATCTG TGCGCGTACC TGCGCCTGAT CGCGAACGCC
GACGACGATC CGGCGTTCAT CCGCGCGGTC ACGACGCCGC GCCGCGGGAT CGGCAACACG
ACGCTCGAGG CGCTCGGCGC GTTCGCCGGG CAGGCGAAGG TGTCGCTGTT CGAGGCGGTC
TACATGGGCG GGATCGAGGC GCGGCTGTCC GCGCGGCAGA TCGAGCCGCT GAGGATCTTC
TGCGATTTCA TCCAGCGCCT GACCGACCGC GCGGACAAGG AGCCCGCGAC CGTCGTGCTC
GACGACATGA TGGAAGCGAT CCACTACGAA GCGTACCTGT ACGACGCCTA CGACGAACGG
CAGGCGCAGA CGAAGTGGCA GAACGTGCTC GAATTCCTTG AATGGCTGAA GCGCAAGGGG
ACGAAGCCGG AGCCGGACGA GGCGGTGGAC GGCGAGGCGG AAGGCTTCCA CAACGCGGAC
GGCCTCGCCG ATACCGGCAA GAACCTGCTC GGGCTGATCC AGACGGTCGC GCTGATGTCG
ATGCTCGAAG GCAAGGAAGA AGATCCGGAC GCGGTGCGCT TGTCGACCGT GCATGCGTCG
AAGGGGCTCG AGTATCCGCA CGTGTTCTTG GTCGGCGTCG AGGAAGGGAT CATGCCGCAC
AGCGGCGGCA GCGACGACGG CCCGATCGAC GACGAGCGGA TCGAGGAAGA GCGCCGGCTG
ATGTACGTCG CGATCACGCG CGCGCAGCGC AGCCTGCATC TGAACTGGTG CAAGAAGCGC
AAGCGGGCGC GCGAGACAAT CGTCTGCGAA CAGTCGCGTT TCATCGCCGA GATGGGGCTC
GACGAGGCGC CGCCGCCGAC GCCGGAAGAG GCGCCGATGA CGCCGAAGGA TCGGCTCGCG
AGCCTGAAGG CGCTGCTGCA GAAGTGA
|
|---|
| Protein sequence | MLDGDEQENR TGDDRQPGEP ARDRWPPPSA RHRHKQQEQR DQRELQREHR GTSGKKAMLS
ERLATRRRAA AMPHACVTSP ADAPAARAPG AHRPNGRRGR RFTYAKESPA AAVLTCASRE
PFAAAGAALR APAALRSRRL PASPPSTATP SAIMSAGLNP AQSEAVRYLD GPCLVLAGAG
SGKTRVITQK IAHLIEAKGF EPRHIAAVTF TNKAAAEMRE RVGKLLEGKT LTTPGKEGRK
VPVNQLTVCT FHSLGVQILR QEAEHVGLKP QFSIMDSDDC FGMIQEQIGT TDKGLIRKIQ
TIISLWKNGL VTPEEAMTIA ANEDEHQAAL VYRNYVATLH AYQAVDFDDL IRLPTELFAK
NEPVRDRWQN RLRYLLIDEY QDTNACQYEL LKLLAGPRAA FTAVGDDDQA IYGWRGATLE
NLAQLGKDFP KLHVIKLEQN YRSTVRILTA ANNVIANNPK LFEKKLWSEH GMGDSITVTP
CNDEEHEAES VVFRLSAHKF ERRTQFRDYA ILYRGNFQAR IFEQVLRRER IPYVLSGGQS
FFDKAEIKDL CAYLRLIANA DDDPAFIRAV TTPRRGIGNT TLEALGAFAG QAKVSLFEAV
YMGGIEARLS ARQIEPLRIF CDFIQRLTDR ADKEPATVVL DDMMEAIHYE AYLYDAYDER
QAQTKWQNVL EFLEWLKRKG TKPEPDEAVD GEAEGFHNAD GLADTGKNLL GLIQTVALMS
MLEGKEEDPD AVRLSTVHAS KGLEYPHVFL VGVEEGIMPH SGGSDDGPID DERIEEERRL
MYVAITRAQR SLHLNWCKKR KRARETIVCE QSRFIAEMGL DEAPPPTPEE APMTPKDRLA
SLKALLQK
|
|---|
| |