| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I3225 |
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| Symbol | |
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| ID | 3847161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007651 |
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| Strand | + |
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| Start bp | 3671318 |
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| End bp | 3674098 |
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| Gene Length | 2781 bp |
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| Protein Length | 926 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637842891 |
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| Product | Rhs element Vgr protein, putative |
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| Protein accession | YP_443719 |
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| Protein GI | 83718625 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCAATT TGAACGATAC GCTACGCAAT TTTGCGTCGG GGGCGGTCGA CTGGAATAAA
CGTCCGGTCG CGTTGCACTT TGGCGCCGCG CAAGGCGCGC TGGGCCACCT CCTCGCGTTG
CAACACGCCA GTGTTCAGGA AGGTCTGATG ACCGGGATTG GCGGGCGATT GACCTGTGTT
TCGACCCGTC GCGACATCCC ACCCGGCGTG TTTCTCGGCA TGCCGGTCTC GATCCGGCTC
ATTACCGATC GCGGACAGCC GCACATGGTG AACGCGATCA TCAGCGACGT CCAGATCGGC
CAAAGCGACG GCGAGCTCTG TGTGTACCAG CTGACGGTCT GCGACGCGCT GTCGCTGATG
GACAAGCGCA CCAATTCGCG GGTCTTCCGA AAGCGCAGCG TCATCGATGT GCTCGCCACG
CTGTTCAACG AATGGCAGCA GCGCAGCCCG GCCCTCGCGC GCGCATTCGA ATTCGATCTG
TCCGGCTTGC GCGCCGATCG CTATCCGCCC CGCGAACTGA CCCGGCAAGT CAACGAATCG
GATGCGCATT TCGTGCGCCG TCTGCTGCGC CGCGAAGGGA TCACCGTGTT CGCGAAGGCG
GGGCCGGCGA AGGGCGAACA GCCGTTGCAG GGCGATGCGA CCGTGCACAC GCTCGTGTGC
TGTGACGAGC CGATGTCGCT GCCGCAAGCG CCGGCCGGCA CGGTTCGCTT GCATCCGCGC
GACGCCGGCA CCGAGCAGCG CGACACGGTC ACGCTGTTCG CGCTGCGTCG GCAATTGGTG
CCCGGCAAGG CCGGACGCCC GTCGTGGGAC TACAAGAAGG CGCGGATCGA CGAATCGAGC
GTCGCTTCGA GCCTCGATCA GGGCGAGGCG GGCAACGATC TGGCGAAGCT GCTGACCGAC
ATCGCGATCG ACATTCCGCA CGCGGGCGAT TCATGGAGCG ATCACGAGCG GCTCACCCGC
GCGCGCATGC TCGCGCACGA GTTCGAGGCC GAGCGCTACG ACGGCGTTAG CAGCGTGCGG
GATCTGGCCG TGGGCGCGTG GATCACGCTG ACGGGCGATC CGGACTGGGA CAGGCAACTC
GCCGACAAGC GCCAGTTCGT GATCACGTCG ATCGATCATG ACATCTGGAA CAACCTGCCG
AAGGGGCTCA ATGACCGCGT GCACGCGCTG TTCGCCGCGA GCCGCAATCT CGTGAACGCG
CCCGGCGCGC TGCCGGCCGC GCTTGCGAAC GACGCGGATA CGCGCTACGA GAACACGTTC
ACCTGCGTGC GCCGCGGCGT GCCGCTTGCG CCCGCGTACG ATCCGCAAGC CGATTTGCCG
CCCGTGCATC TGCTCACGGG CACGATCGTC GGCGCGGAGG GCGAGGAAGT GTTCTGCGAC
GAAAACGGCC GGGTGCGCGT GCGGGTGCAC GGCCTCGACC CGGCGGACCA CGCGCACGCG
CAGGGCGCGG GCACCAACGA CAACGCGGGC GACAGCGCGC CGATCCGCGT GGCGTCGAGC
CTCGCCGGCG CCCATTTCGG CGCATCGTTT CTGCCGCGAG TCGGCATGGA AGTCCTCCTC
GGCTGTCTCG GCGGCGATCC GGACCGGTTG GTGATCATCG GCGTGCTCGG TAACGGCGCG
AATCCGCCGG CGACGTTCAG CCATGCGGGC GGCTTGCCGG GCAACCGCTA CCTGTCCGGC
ATCAAGACGA AGGAGATCAA GGGGCAGCGG TACAACCAGC TGCGTCTCGA CGACACGCCG
AACCAGATCA GCGCGCAACT GGCGAGCGAG CATGCGCATT CGCAGCTCAA TCTCGGATAC
CTGACCCAAC CGCGCGAGAA CGGTCATGGC AACGACCGCG GCGAGGGCGC GGAGCTGCGT
ACCGACGCGG CGGCGGCGCT GCGGGCGGCG CAAGGCATTC TGCTGACGAC CTACGCGCGC
ACGCAGGCGA GCGGCGGGCA ACTGGACCGT GACGAGCTGA TTCGGTTGCT CGGCGAGTGC
TCGGAGCTGT TCAAGGCGCT GGGCGACTAC GCGGGGCAGC ACGGCGGGCA GGCTGCGGAT
ACGGCCGGCC AGCACGCGGT GGCCGCCGCC TTCAGGAACT GGACGCCGGG CGCGGGCGGC
GCCGATGCGC CGCCCGACGG CGGAGATCGC GCGCTGATGG CGTTCGGCGC GCAGGCCGGC
TCGGTGAACG TCACGCCGAA GACGCACGTG ACGTATGCCG GAGAGAACAT CGATCAGGTT
GCGCAGCAGC ACCTGCAACT GATGAGCGGC CAGCGGCTGA ACGCGACGGC CGGGCAGGGC
ATGCAACTCT TCGCGCGGGG CGCGGGCGTG CAGGCCGTGG CGGGCGAAGG GCCGATGCTG
CTGCAGGCGC AAGCCGATAC GTTGACGGCG AATGCGCAGA AGGGCGTCAA GATCACGACG
AACGAGCACG AGGTGTTCGT GAGCGCGCCG AGGATTCGGC TCGTCGCCGA GGACGGCAGC
TACCTCGAGA TCGGCAACGG CATCACGCTC GGCACGAACG GCGACATCAA GCTGCTGTCG
GCGTCGCACC AGTGGGGCGG GCCGTCGACG GCGCAGGCGG CGAAGACCGC GTTCGACAAC
CAGCCGACGG ATCAGCGTTT CAAGCTGCAC TATCCGGGCG AGGACGGCGA TTTGCCGGCT
GCGGCGAACA AGCCATTCCG GATCACGCTG AACGACGGGC GCGTCATCGA GGGCAAGACC
GATGCGAGCG GCCTGACGGA TCTGGTCAAG GACGACGCGA TGCGTATCGC GAAGATCGAC
TATCTGAAAC CGAAGCTTTG A
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| Protein sequence | MTNLNDTLRN FASGAVDWNK RPVALHFGAA QGALGHLLAL QHASVQEGLM TGIGGRLTCV
STRRDIPPGV FLGMPVSIRL ITDRGQPHMV NAIISDVQIG QSDGELCVYQ LTVCDALSLM
DKRTNSRVFR KRSVIDVLAT LFNEWQQRSP ALARAFEFDL SGLRADRYPP RELTRQVNES
DAHFVRRLLR REGITVFAKA GPAKGEQPLQ GDATVHTLVC CDEPMSLPQA PAGTVRLHPR
DAGTEQRDTV TLFALRRQLV PGKAGRPSWD YKKARIDESS VASSLDQGEA GNDLAKLLTD
IAIDIPHAGD SWSDHERLTR ARMLAHEFEA ERYDGVSSVR DLAVGAWITL TGDPDWDRQL
ADKRQFVITS IDHDIWNNLP KGLNDRVHAL FAASRNLVNA PGALPAALAN DADTRYENTF
TCVRRGVPLA PAYDPQADLP PVHLLTGTIV GAEGEEVFCD ENGRVRVRVH GLDPADHAHA
QGAGTNDNAG DSAPIRVASS LAGAHFGASF LPRVGMEVLL GCLGGDPDRL VIIGVLGNGA
NPPATFSHAG GLPGNRYLSG IKTKEIKGQR YNQLRLDDTP NQISAQLASE HAHSQLNLGY
LTQPRENGHG NDRGEGAELR TDAAAALRAA QGILLTTYAR TQASGGQLDR DELIRLLGEC
SELFKALGDY AGQHGGQAAD TAGQHAVAAA FRNWTPGAGG ADAPPDGGDR ALMAFGAQAG
SVNVTPKTHV TYAGENIDQV AQQHLQLMSG QRLNATAGQG MQLFARGAGV QAVAGEGPML
LQAQADTLTA NAQKGVKITT NEHEVFVSAP RIRLVAEDGS YLEIGNGITL GTNGDIKLLS
ASHQWGGPST AQAAKTAFDN QPTDQRFKLH YPGEDGDLPA AANKPFRITL NDGRVIEGKT
DASGLTDLVK DDAMRIAKID YLKPKL
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