| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I3166 |
|---|
| Symbol | fliA |
|---|
| ID | 3848766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | - |
|---|
| Start bp | 3610596 |
|---|
| End bp | 3611327 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637842832 |
|---|
| Product | flagellar biosynthesis sigma factor |
|---|
| Protein accession | YP_443660 |
|---|
| Protein GI | 83719422 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
|---|
| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATAACG CTCAAGGCAA GATTTCCCAG GACGCAGTGC TGACGCAATA TGCGCCGCTC
GTGCGTCGTC TGGGCCTGCA GCTCGTCGCG AAGATGCCGG CGAGCGTGGA CCTCGACGAC
CTGATCCAGG CCGGCATGAT CGGCCTGCTC GACGCGGCGA GCCGCTACAA GGAAGACCAG
GGCGCGCAGT TCGAGACTTA CGCGACGCAG CGCATCCGCG GCGCGATGCT CGACGAGCTG
CGCAGCAACG ACTGGCTGCC GCGCAGCCTG CGCAAGACAT CGCGCGAGGT CGAGCACGCA
GTGCATCAGG TCGAGCAGCG GCTCGGCCGC TCGGCGAACG AGACGGAGAT CGCCGCGCAT
CTGCAGATGC CGCTCGACGA ATACCAGTCG ATGCTGCAGG ACCTGCACGG CAGCCAGCTC
GTCTACTACG AGGATTTCGA TCGCTCGGCC GACGACGAGC CGTTCCTCGA CCGCTACCGC
GCCGACCACA GCGATCCGCT GTCCGCGCTG CTCGACGAGC ATCTGCGCAG CGCGCTCGTC
GACGCGATCG AGCACCTGCC GGAGCGCGAG AAGCTGCTGA TGTCGCTGTA CTACGAGCGC
GGGCTGAACC TGCGCGAGAT CGGCGCGGTG CTCGAGGTGA GCGAGTCGCG CGTGTGCCAG
TTGCACAGCC AGGCGGTCGC GCGGCTGCGC GCGAAGCTGC GCGAGCAGGC GTGGGTCGGC
ACGGAGAACT GA
|
|---|
| Protein sequence | MYNAQGKISQ DAVLTQYAPL VRRLGLQLVA KMPASVDLDD LIQAGMIGLL DAASRYKEDQ
GAQFETYATQ RIRGAMLDEL RSNDWLPRSL RKTSREVEHA VHQVEQRLGR SANETEIAAH
LQMPLDEYQS MLQDLHGSQL VYYEDFDRSA DDEPFLDRYR ADHSDPLSAL LDEHLRSALV
DAIEHLPERE KLLMSLYYER GLNLREIGAV LEVSESRVCQ LHSQAVARLR AKLREQAWVG
TEN
|
|---|
| |