Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_I3079 |
Symbol | rplA |
ID | 3847576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007651 |
Strand | - |
Start bp | 3518860 |
End bp | 3519558 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637842745 |
Product | 50S ribosomal protein L1 |
Protein accession | YP_443583 |
Protein GI | 83719781 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0081] Ribosomal protein L1 |
TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.22613 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAAGA TCTCGAAGCG CCGTCAGGCA TTTGCCGCTA AGGTCGATCG TCAGAAGTTG TATCCGATCG ATGACGCACT CGCCCTCGTG AAGGAATGCG CGAGCGCGAA GTTCGACGAG TCGATCGATG TCGCGGTTCA GCTCGGCATC GATGCGAAGA AGTCGGACCA GGTCGTTCGT GGCTCGGTCG TGCTGCCGGC CGGTACCGGC AAGTCGGTTC GTGTCGCCGT GTTCGCGCAA GGCGAGAAGG CTGAGCAAGC ACGCGCCGCA GGTGCCGAAG TGGTCGGCAT GGAAGACCTC GCCGAGCAGA TCAAGGCCGG CCAAATGGAC TTCGACATCG TGATCGCTTC GCCGGACACG ATGCGTATCG TCGGTACGCT GGGTCAGATC CTCGGCCCGC GCGGCCTGAT GCCGAACCCG AAGGTCGGCA CGGTCACGCC GGACGTCGCG ACCGCGGTGA AGAACGCGAA GGCGGGTCAG GTGCAGTTCC GCGTCGACAA GGCCGGTATC ATCCACGCGA CGATCGGCCG CGCATCGTTC GAACCGACCG CGCTGCGCAC GAACCTGTCC GCGCTGATCG AAGCGCTGCA GAAGGCGAAG CCGGCGACGA GCAAGGGCGT GTACCTGCGC AAGATCGCGC TGTCGAGCAC GATGGGCGTC GGCGTTCGCG TCGACCAGGG CTCGCTGGCT GCGCAGTAA
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Protein sequence | MAKISKRRQA FAAKVDRQKL YPIDDALALV KECASAKFDE SIDVAVQLGI DAKKSDQVVR GSVVLPAGTG KSVRVAVFAQ GEKAEQARAA GAEVVGMEDL AEQIKAGQMD FDIVIASPDT MRIVGTLGQI LGPRGLMPNP KVGTVTPDVA TAVKNAKAGQ VQFRVDKAGI IHATIGRASF EPTALRTNLS ALIEALQKAK PATSKGVYLR KIALSSTMGV GVRVDQGSLA AQ
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