Gene BTH_I3079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_I3079 
SymbolrplA 
ID3847576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007651 
Strand
Start bp3518860 
End bp3519558 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content65% 
IMG OID637842745 
Product50S ribosomal protein L1 
Protein accessionYP_443583 
Protein GI83719781 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0081] Ribosomal protein L1 
TIGRFAM ID[TIGR01169] ribosomal protein L1, bacterial/chloroplast 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.22613 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAGA TCTCGAAGCG CCGTCAGGCA TTTGCCGCTA AGGTCGATCG TCAGAAGTTG 
TATCCGATCG ATGACGCACT CGCCCTCGTG AAGGAATGCG CGAGCGCGAA GTTCGACGAG
TCGATCGATG TCGCGGTTCA GCTCGGCATC GATGCGAAGA AGTCGGACCA GGTCGTTCGT
GGCTCGGTCG TGCTGCCGGC CGGTACCGGC AAGTCGGTTC GTGTCGCCGT GTTCGCGCAA
GGCGAGAAGG CTGAGCAAGC ACGCGCCGCA GGTGCCGAAG TGGTCGGCAT GGAAGACCTC
GCCGAGCAGA TCAAGGCCGG CCAAATGGAC TTCGACATCG TGATCGCTTC GCCGGACACG
ATGCGTATCG TCGGTACGCT GGGTCAGATC CTCGGCCCGC GCGGCCTGAT GCCGAACCCG
AAGGTCGGCA CGGTCACGCC GGACGTCGCG ACCGCGGTGA AGAACGCGAA GGCGGGTCAG
GTGCAGTTCC GCGTCGACAA GGCCGGTATC ATCCACGCGA CGATCGGCCG CGCATCGTTC
GAACCGACCG CGCTGCGCAC GAACCTGTCC GCGCTGATCG AAGCGCTGCA GAAGGCGAAG
CCGGCGACGA GCAAGGGCGT GTACCTGCGC AAGATCGCGC TGTCGAGCAC GATGGGCGTC
GGCGTTCGCG TCGACCAGGG CTCGCTGGCT GCGCAGTAA
 
Protein sequence
MAKISKRRQA FAAKVDRQKL YPIDDALALV KECASAKFDE SIDVAVQLGI DAKKSDQVVR 
GSVVLPAGTG KSVRVAVFAQ GEKAEQARAA GAEVVGMEDL AEQIKAGQMD FDIVIASPDT
MRIVGTLGQI LGPRGLMPNP KVGTVTPDVA TAVKNAKAGQ VQFRVDKAGI IHATIGRASF
EPTALRTNLS ALIEALQKAK PATSKGVYLR KIALSSTMGV GVRVDQGSLA AQ