| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I3076 |
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| Symbol | rpoB |
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| ID | 3850002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007651 |
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| Strand | - |
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| Start bp | 3513157 |
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| End bp | 3517263 |
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| Gene Length | 4107 bp |
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| Protein Length | 1368 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637842742 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_443580 |
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| Protein GI | 83719958 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATATT CCTTCACCGA GAAGAAGCGC ATTCGCAAGA GTTTCGCGAA GCGTTCCATC
GTTCACCAAG TGCCTTTCCT GCTGGCCACC CAGCTTGAAT CATTCAGCAC ATTTCTGCAA
GCCGATGTGC TGCCCGCGCA ACGCAAGTCC GAAGGGTTGC AGGCCGCCTT CACGTCGGTG
TTTCCCATCG TCTCGCACAA CGGCTTCGCT CGTCTCGAGT TCGTGAGCTA TGCGTTGTCG
TCGCCGGCAT TCAACATCAA GGAATGCCAG CAGCGCGGCC TGACCTATTG CTCGGCGCTG
CGCGCGAAGG TGCGCCTCGT GCTCCTCGAC AAGGAGTCGC CGAGCAAACC CGTCGTCAAG
GAAGTAAAGG AACAGGAAGT GTACATGGGC GAAATTCCGC TCATGACGCC GACCGGTTCG
TTCGTCATCA ACGGTACCGA GCGCGTGATC GTTTCGCAGC TGCACCGCTC GCCGGGCGTG
TTCTTCGAGC ACGACAAGGG CAAGACGCAC AGCTCGGGCA AGCTGCTGTT CTCCGCGCGG
ATCATTCCGT ACCGCGGCTC GTGGCTAGAC TTCGAATTCG ATCCGAAGGA CGTGCTGTAC
TTCCGCGTCG ACCGCCGTCG CAAGATGCCG GTCACGATCC TGCTGAAGGC GATCGGCCTC
ACGCCGGAGC AGATCCTCGC GAACTTCTTC GTCTTCGACA ACTTCACGCT GATGGACGAA
GGCGCGCAGA TGGAGTTCGT GCCCGAGCGC CTGCGCGGCG AAGTCGCACG CTTCGACATC
ACCGATCGTG AAGGCAAGGT CATCGTCCAG AAGGACAAGC GGATCAACGC GAAGCACATT
CGCGATCTCG AAGCCGCGAA GACCAAGTAC ATCTCGGTGC CCGAAGACTA TCTGCTCGGC
CGCGTGCTTG CGAAGAACGT CGTCGACGGC GATACGGGCG AAGTGATCGC GAACGCCAAC
GACGAGATCA CGGAAGGCGT GCTCGACAAG CTGCGCGAAG CGAAGATCAA GGAAATCCAG
ACGCTCTACA CGAACGATCT GGACCAGGGT CCGTACATCT CGTCGACGCT GCGTGTCGAC
GAAACCGTCG ACAAGACGGC CGCGCGCATC GCGATCTACC GGATGATGCG TCCGGGCGAG
CCGCCGACGG AAGAAGCCGT CGAGGCGCTG TTCAATCGCC TGTTCTACAG CGAAGACGCG
TACGACCTGT CGAAGGTCGG CCGCATGAAG TTCAACCGCC GCGTCGGCCG TGACGAAATC
ACCGGCCCGA TGACGCTGCA GGACGACGAC ATCCTCGCGA CGATCAAGAT TCTCGTCGAG
CTGCGCAACG GCAAGGGCGA AGTCGACGAC ATCGACCACC TCGGCAACCG GCGCGTGCGC
TGCGTCGGCG AACTGGCGGA AAACCAGTTC CGCGCGGGCC TCGTGCGCGT CGAACGCGCG
GTGAAGGAGC GCCTCGGCCA GGCCGAGAGC GAAAACCTGA TGCCGCACGA CCTGATCAAC
TCGAAGCCGA TTTCGTCGGC GATTCGCGAG TTCTTCGGCT CGTCGCAGCT GTCGCAGTTC
ATGGACCAGA CCAACCCGCT GTCGGAAATC ACGCACAAGC GCCGCGTTTC CGCACTGGGC
CCGGGCGGTC TGACGCGCGA GCGCGCGGGC TTCGAAGTCC GCGACGTGCA CCCGACCCAC
TACGGCCGCG TGTGCCCGAT CGAAACGCCG GAAGGTCCGA ACATCGGTCT CATCAACTCG
CTCGCGCTGT ATGCGCACCT GAACGAATAC GGCTTCCTCG AGACGCCGTA CCGCAAGGTC
GTCGACAGCA AGGTGACCGA CCAGATCGAC TATCTGTCGG CGATCGAGGA AGGCCGCTAC
ATGATCGCGC AGGCAAACGC GGCGATCAGC AACGATGGCT CGCTCGTCGA CGAACTCGTG
TCGTCGCGTG AAGCCGGCGA AACGATGATG GTCACGCCGG ACCGCATCCA GTACATGGAC
GTCGCGCCGT CGCAGATCGT GTCGGTTGCA GCCTCGCTGA TTCCGTTCCT CGAGCACGAC
GATGCGAACC GTGCGCTGAT GGGCTCGAAC ATGCAGCGTC AGGCCGTGCC GTGTCTGCGT
CCGGAGAAGC CCGTCGTCGG TACCGGCATC GAGCGTACCG TGGCGGTCGA CTCGGGCACG
ACGGTGCAGG CGTTGCGCGG CGGCGTCGTC GATTACGTCG ACGCGGGCCG TATCGTCATT
CGCGTGAACG ATGACGAAGC GGTCGCGGGC GAAGTCGGCG TCGACATCTA TAACCTGATC
AAGTACACGC GTTCGAACCA GAACACGAAC ATCAATCAGC GTCCGATCGT GAAGATGGGC
GACAAGGTCG CGCGCGGCGA CGTGCTGGCC GACGGCGCGT CGACGGACCT GGGCGAGCTC
GCGCTCGGCC AGAACATGCT GATCGCGTTC ATGCCGTGGA ACGGCTACAA CTTCGAGGAT
TCGATCCTGA TCTCGGAGCG CGTCGTCGCG GACGATCGCT ACACGTCGAT CCACATCGAA
GAGTTGAACG TCGTCGCACG CGACACGAAG CTCGGGCCGG AAGAAATCAC GCGCGATATC
TCGAACCTCG CGGAAGTCCA GCTTGGCCGT CTCGACGAAT CGGGCATCGT GTACATCGGT
GCGGAAGTCG AAGCGGGCGA CGTGCTGGTC GGCAAGGTGA CGCCGAAGGG CGAAACCCAG
CTGACGCCGG AAGAGAAGCT GCTGCGCGCG ATCTTCGGCG AGAAGGCGTC GGACGTGAAG
GACACGTCGC TGCGCGTGCC GTCGGGCATG AGCGGCACGG TGATCGACGT CCAGGTGTTC
ACGCGTGAAG GCATCCAGCG CGACAAGCGT GCGCAACAGA TCATCGACGA CGAACTGAAG
CGCTACCGCC TCGACTTGAA CGACCAGCTG CGCATCGTGG AAGGCGACGC GTTCCAGCGT
CTCGCACGCA TGCTCGTGGG CAAGGTCGCG AACGGCGGAC CGAAGAAGCT CGCGAAGGGC
ACGAAGATCG ACCAGGCATA CCTGGAAGAC CTCGACCACT ACCACTGGTT CGACATCCGC
CTCGCGGACG ACGAGGCAGC CGCGCAACTC GAAGCGATCA AGAACTCGAT CGAAGAGAAG
CGTCACCAGT TTGACCTCGC GTTCGAAGAG AAGCGCAAGA AGCTCACGCA AGGCGACGAA
CTGCCGCCGG GCGTGCTGAA GATGGTCAAG GTGTACCTCG CGGTGAAGCG CCGTCTGCAG
CCTGGCGACA AGATGGCGGG CCGTCACGGT AACAAGGGCG TCGTGTCGAA GATCGTCCCG
GTCGAAGACA TGCCGTACAT GGCGGACGGC CGTCCGGCCG ACGTCGTGCT GAACCCGCTC
GGCGTGCCGT CGCGGATGAA CGTGGGTCAG GTTCTGGAAG TGCACCTCGG CTGGGCGGCG
AAGGGCCTCG GCTGGCGTAT CGGCGAGATG CTCGCGCGTC AGACGAAGAT CGAGGAACTG
CGTGTGTTCC TGACCAAGAT CTACAACGAG TCGGGCCGTG CGGAAGACCT CGAGAGCTTC
AGCGACGACG AGATCCTCGA ACTCGCGAAG AACCTGCGCG AAGGCGTGCC GTTCGCGACG
CCGGTGTTCG ACGGCGCGAC CGAAGAAGAA ATGTCGAAGA TGCTCGACCT CGCGTTCCCG
GACGACATCG CCGAACAGCT CGACATGAAC CCGTCGAAGA ATCAGGTGCG CCTGTACGAC
GGCCGCACGG GCGAGCCGTT CGAGCGCCGC GTGACGGTCG GCTACATGCA CTACCTGAAG
CTGCACCACT TGGTCGACGA CAAGATGCAC GCGCGTTCGA CGGGCCCGTA CTCGCTCGTC
ACGCAGCAAC CGCTCGGCGG CAAGGCGCAG TTCGGCGGCC AGCGTTTCGG TGAAATGGAA
GTGTGGGCGC TCGAAGCGTA TGGCGCTTCG TACGTGCTGC AGGAAATGCT GACGGTGAAG
TCGGACGACG TGACCGGCCG GACCAAGGTT TATGAGAACC TGGTCAAGGG CGACCATGTC
ATCGATGCCG GCATGCCCGA GTCGTTCAAC GTGTTGGTGA AGGAAATCCG GTCGCTCGGT
ATCGACATCG ACCTGGACCG GAACTAA
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| Protein sequence | MQYSFTEKKR IRKSFAKRSI VHQVPFLLAT QLESFSTFLQ ADVLPAQRKS EGLQAAFTSV
FPIVSHNGFA RLEFVSYALS SPAFNIKECQ QRGLTYCSAL RAKVRLVLLD KESPSKPVVK
EVKEQEVYMG EIPLMTPTGS FVINGTERVI VSQLHRSPGV FFEHDKGKTH SSGKLLFSAR
IIPYRGSWLD FEFDPKDVLY FRVDRRRKMP VTILLKAIGL TPEQILANFF VFDNFTLMDE
GAQMEFVPER LRGEVARFDI TDREGKVIVQ KDKRINAKHI RDLEAAKTKY ISVPEDYLLG
RVLAKNVVDG DTGEVIANAN DEITEGVLDK LREAKIKEIQ TLYTNDLDQG PYISSTLRVD
ETVDKTAARI AIYRMMRPGE PPTEEAVEAL FNRLFYSEDA YDLSKVGRMK FNRRVGRDEI
TGPMTLQDDD ILATIKILVE LRNGKGEVDD IDHLGNRRVR CVGELAENQF RAGLVRVERA
VKERLGQAES ENLMPHDLIN SKPISSAIRE FFGSSQLSQF MDQTNPLSEI THKRRVSALG
PGGLTRERAG FEVRDVHPTH YGRVCPIETP EGPNIGLINS LALYAHLNEY GFLETPYRKV
VDSKVTDQID YLSAIEEGRY MIAQANAAIS NDGSLVDELV SSREAGETMM VTPDRIQYMD
VAPSQIVSVA ASLIPFLEHD DANRALMGSN MQRQAVPCLR PEKPVVGTGI ERTVAVDSGT
TVQALRGGVV DYVDAGRIVI RVNDDEAVAG EVGVDIYNLI KYTRSNQNTN INQRPIVKMG
DKVARGDVLA DGASTDLGEL ALGQNMLIAF MPWNGYNFED SILISERVVA DDRYTSIHIE
ELNVVARDTK LGPEEITRDI SNLAEVQLGR LDESGIVYIG AEVEAGDVLV GKVTPKGETQ
LTPEEKLLRA IFGEKASDVK DTSLRVPSGM SGTVIDVQVF TREGIQRDKR AQQIIDDELK
RYRLDLNDQL RIVEGDAFQR LARMLVGKVA NGGPKKLAKG TKIDQAYLED LDHYHWFDIR
LADDEAAAQL EAIKNSIEEK RHQFDLAFEE KRKKLTQGDE LPPGVLKMVK VYLAVKRRLQ
PGDKMAGRHG NKGVVSKIVP VEDMPYMADG RPADVVLNPL GVPSRMNVGQ VLEVHLGWAA
KGLGWRIGEM LARQTKIEEL RVFLTKIYNE SGRAEDLESF SDDEILELAK NLREGVPFAT
PVFDGATEEE MSKMLDLAFP DDIAEQLDMN PSKNQVRLYD GRTGEPFERR VTVGYMHYLK
LHHLVDDKMH ARSTGPYSLV TQQPLGGKAQ FGGQRFGEME VWALEAYGAS YVLQEMLTVK
SDDVTGRTKV YENLVKGDHV IDAGMPESFN VLVKEIRSLG IDIDLDRN
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