| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I3025 |
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| Symbol | |
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| ID | 3848005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007651 |
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| Strand | - |
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| Start bp | 3467494 |
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| End bp | 3469224 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637842691 |
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| Product | type II/III secretion system protein |
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| Protein accession | YP_443529 |
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| Protein GI | 83720708 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | [TIGR02515] type IV pilus secretin (or competence protein) PilQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCGCG GATTCGTTTG GGTCATGCTG GGATGCGCGA TCGGGGCGGC GGGCGTGGCG
GTCGCATCGC CGCCGCCGTT GCCCGCGGGT GTGCCGGCCG GTTGGGCGGT GTCGGCCTCG
GTCGGAGCGG TGGGGCGCGC GCCGTTGCCC GACGCGGCCG CGTCGAGGTG GCGAATCGAT
TCCGAGCGTG ACGCGGTTGC CGAAGCGCCG ACGCCGGATG CGGGCGGCGG CGCGCCGGCC
GATGAGTTCG CCGGCGACGC CGCGCCCGAA AGCACGTCGG CAGCCAATTC GGTCGAGCCA
TCCGGTTCGG CGCCGGCCGC CACCGGGCTG CCGAGCCGGG CGGCGTCGGT GCAAGCGGAG
GATGCGGCGC TGGATGCGGT GCTGGAGGGG CCGCCCGTGC CACTCTCGCC GGAGCAACGC
ATGAGCGACG AGCATCCTGC GTTGCCGTCG GATACTGAAG TCGCATCGGC CGGCGCCAAC
GCCAACGCCA ACGCCAATGC CGAGACCGCG GCCGAATCCG ACGACAACCG CGCGATCTCG
CTCAATCTGC AGCAGGCGAG CCTCGCAGCG GTCTTCGATG CATTCGCGCG CTTCACCGGC
CTCAATATAG TGGTCAGCGA GCGGGTGCGC GGCACGGTGT CGTTGCGTCT GAACAATGTC
CGCTGGCGCA GTGCGTTCGA CGCGCTGCTG GACGCCCACG GCCTCGCGAT GGCGCGGCGC
GGCAGCGTGA TATGGGTCGC GCCTGTCGCG GAACTCGCCG AGCGCGAGCG CCGGCGTTTC
GATGCGCACG CGCGCGCCGC TCAACTCGAA CCGCTCGCGA GCCGCAGCTT CGTGCTCCGC
TACGCGCGTG CGGCCGACGT GCAGCGTCTG CTCTCGGGCT CGGCCGCCCA GCGGATACTG
TCGAAGCGCG GCTCGGTGCT CGCCGATCCT CGGACGAATC TGCTGTTCGT CACGGATCTG
TCCGGGCGTC TCGCGCAGAT CGCCGATCTC ATCGGCAAGC TCGACACGCC ATCGCGGCAG
GTGTTGATCG AGGCGCGGAT CGTCGAGGGC GATCGCGGGT TCTCACGCAA TCTCGGCGCG
CGTCTCGCGC TGCGTGCGCC GGATGCGGGC GACCGCGCGG CGGGCGTCGT CGCGGGCCGT
AACGGCACGT TGGCCGACCT CACCGCCAGG CCGATCAGCG GCTTCGACGC GGCGACAGCC
GGCCTCACGC TGTTCGCCGC GCGCGCGAGC CGCTTGCTCG ACATCGAATT GAGCGCGCTC
GAGGCGCAGG GCCGGGGCCA GATCGTGTCG AGCCCGCGCG TCGTGACGGC GGACCGGACC
AAGGCCGTCG TCGAGCAGGG CGCAGAACTG CCGTATCAGG CGAAGGTAGG CAACGGCGTG
TCGGGCGTCC AGTTCCGGCG CGCGACCTTG AAGCTCGAAG TCGAGCCGCA GATCACGCCC
GACGGGCGCG TGATCCTCGA TCTCGACGTC GCGAAGGACA GCGTCGGCGA GGAAACCGCA
TCCGGCCCCG CGATCCATAC GAAGCACGTG CAGACGCGCG TCGAGGTCGA AAACGGCGGA
ACGGTGTCGA TCGGCGGGAT TTTCGAGAGC GACGACCGCG ACGATGTGAC TCGGGTGCCG
CTCTTGGGCA AAATACCGGT GTTGGGCGCG CTTTTCAGGC ATCGCGCACA GCGTGCGCAG
CGCAGCGAGC TCGTCGTCTA CATCACGCCG ACCGTCGTGA TCGGGCCCTG A
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| Protein sequence | MMRGFVWVML GCAIGAAGVA VASPPPLPAG VPAGWAVSAS VGAVGRAPLP DAAASRWRID
SERDAVAEAP TPDAGGGAPA DEFAGDAAPE STSAANSVEP SGSAPAATGL PSRAASVQAE
DAALDAVLEG PPVPLSPEQR MSDEHPALPS DTEVASAGAN ANANANAETA AESDDNRAIS
LNLQQASLAA VFDAFARFTG LNIVVSERVR GTVSLRLNNV RWRSAFDALL DAHGLAMARR
GSVIWVAPVA ELAERERRRF DAHARAAQLE PLASRSFVLR YARAADVQRL LSGSAAQRIL
SKRGSVLADP RTNLLFVTDL SGRLAQIADL IGKLDTPSRQ VLIEARIVEG DRGFSRNLGA
RLALRAPDAG DRAAGVVAGR NGTLADLTAR PISGFDAATA GLTLFAARAS RLLDIELSAL
EAQGRGQIVS SPRVVTADRT KAVVEQGAEL PYQAKVGNGV SGVQFRRATL KLEVEPQITP
DGRVILDLDV AKDSVGEETA SGPAIHTKHV QTRVEVENGG TVSIGGIFES DDRDDVTRVP
LLGKIPVLGA LFRHRAQRAQ RSELVVYITP TVVIGP
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