| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I3001 |
|---|
| Symbol | |
|---|
| ID | 3846943 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | - |
|---|
| Start bp | 3439333 |
|---|
| End bp | 3440268 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637842667 |
|---|
| Product | lipoprotein VacJ |
|---|
| Protein accession | YP_443505 |
|---|
| Protein GI | 83718408 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2853] Surface lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACGA TCCGCATCAG CCAAGCGGTG CTGGCGGTCA CGGCCGCCGC GGCATTGAGC
GGTTGCGCGA CGGTCCAGAC GCCGACGAAG GGCGATCCGT TCGAAGGCTT CAACCGGACG
ATGTACACGT TCAACGACAA GGTCGACCAG TACGCGCTCA AGCCGGTCGC GCGCGGCTAC
CAGTGGGCGG TGCCGCAGCC GATGCGCGAC AGCGTGACGA ACTTCTTCTC GAACATCGGC
GACGTCTACA TCGCCGCGAA CAACCTCGTG CAGTTGAAGA TCGCCGACGG CGTCGGCGAT
ATCATGCGGG TCGTGATCAA CACGGTGTTC GGCGTGGGCG GCCTGTTCGA CGTCGCGACG
CTCGCGAAGC TGCCGAAGCA CGCGAACGAC TTCGGCGTGA CGCTCGGCCA CTACGGCGTG
CCGAGCGGCC CGTACCTCGT GCTGCCGCTG CTCGGCCCGA GCACCGTGCG CGACACGGCG
GGCCTCGCCG TCGACTACGC GGGCAACCCG CTCACCTACG TGCGGCCCGA CAGCGTGAGC
TGGGGCCTGT TCGGCCTGAA CCTCGTGAAC ACGCGCGCGA ACCTGCTGGG CGCGGGCGAC
GTGCTCGAGG CGGCCGCGAT CGACAAGTAT TCGTTCGTGC GCAACGCGTA CCTGCAGCGC
CGTCAGGCGT TGATCGGCGG TGGCGCGGGG GCGCAGTCGA ACCTGCCGGA TTACGGCAAC
GAAGCGCCGC CGCCGAATTA CGAGATGCCG GAGGAGGGCG CCGCGGCGCC CGCGAGCGGC
GCGGCCGCGG CGCCGGCGGC ATCGGGCGCG CCGGCCGTGG CTGCACCGGC CGCGGCCTCG
GCGCCGAACC CGAGCAGCGC GACGAACGTG CCGGCGCAGC AGGTCGTGCC GCCGTCGCCG
GGCGGCATCC ATTGGCCGAG CATCCGGCTG CACTGA
|
|---|
| Protein sequence | MQTIRISQAV LAVTAAAALS GCATVQTPTK GDPFEGFNRT MYTFNDKVDQ YALKPVARGY
QWAVPQPMRD SVTNFFSNIG DVYIAANNLV QLKIADGVGD IMRVVINTVF GVGGLFDVAT
LAKLPKHAND FGVTLGHYGV PSGPYLVLPL LGPSTVRDTA GLAVDYAGNP LTYVRPDSVS
WGLFGLNLVN TRANLLGAGD VLEAAAIDKY SFVRNAYLQR RQALIGGGAG AQSNLPDYGN
EAPPPNYEMP EEGAAAPASG AAAAPAASGA PAVAAPAAAS APNPSSATNV PAQQVVPPSP
GGIHWPSIRL H
|
|---|
| |