Gene BTH_I2980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_I2980 
SymboltatC 
ID3849331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007651 
Strand
Start bp3424320 
End bp3425102 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content63% 
IMG OID637842646 
ProductSec-independent protein translocase TatC 
Protein accessionYP_443484 
Protein GI83721330 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0805] Sec-independent protein secretion pathway component TatC 
TIGRFAM ID[TIGR00945] Twin arginine targeting (Tat) protein translocase TatC 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGACC CCCAGCACAA TCCGGACGAA GGTCCGGAAG AAACCTTCAT CTCCCATCTC 
GTCGAGTTGC GCGACCGGAT CATTCGGGCA GGCACGGCCG TGATCGTCGT GTTCCTCGGG
CTCGTCTACT GGGCACCGGA CATCTTCCGG CTGCTCGCGC GACCGCTGAT GGAGAACCTG
CCGAAAGGCG GCAAGATGAT CGTGACCGAC GTCACGGGCT CGTTCTTCGT GCCGATGAAG
GTGACGATGC TCGTTGCGCT CGTGATCGCG CTGCCGGTCG TGCTGTACCA AATCTGGGCG
TTCGTCGCGC CGGGGCTCTA TCAGCACGAA AAGAAGCTCG TCGCGCCGCT TGTCGGCAGC
AGCTACGTGC TGTTTCTCTG CGGGATGGCG TTCGCGTACT TCCTCGTGTT TCCGACGATT
TTCCGCGTGA TGGCGCACTA CAACGCGCCG CTCGGTGCCG AGATGTCGAC CGATATCGAC
AATTATCTGA GCTTCGTGCT CGGGATGTTC GTCGCGTTCG GGGTCACGTT CGAGGTGCCG
ATCGTCGTCG TGCTGCTCGT CCGGATGGGC GTGCTGACGG TGAAGAAGCT CAAGGAGATT
CGGCCGTACG TGATCGTCGG CGCGTTCGTC GTCGCGGCCG TCGTGACGCC GCCCGACGTG
TTCTCGCAGT TGATGCTCGC GCTGCCGCTC GTGCTGCTGT ACGAGGCCGG GATCATCGCG
GCGCGGCTGT TCGTGAAGCC GCCCGCGAAG GAAGAGGACG AGAGCGAGGC CGCGGCGAAT
TGA
 
Protein sequence
MSDPQHNPDE GPEETFISHL VELRDRIIRA GTAVIVVFLG LVYWAPDIFR LLARPLMENL 
PKGGKMIVTD VTGSFFVPMK VTMLVALVIA LPVVLYQIWA FVAPGLYQHE KKLVAPLVGS
SYVLFLCGMA FAYFLVFPTI FRVMAHYNAP LGAEMSTDID NYLSFVLGMF VAFGVTFEVP
IVVVLLVRMG VLTVKKLKEI RPYVIVGAFV VAAVVTPPDV FSQLMLALPL VLLYEAGIIA
ARLFVKPPAK EEDESEAAAN