| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I2979 |
|---|
| Symbol | |
|---|
| ID | 3847484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | + |
|---|
| Start bp | 3422762 |
|---|
| End bp | 3423925 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637842645 |
|---|
| Product | serine protease |
|---|
| Protein accession | YP_443483 |
|---|
| Protein GI | 83720352 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
|---|
| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family
[TIGR02038] periplasmic serine pepetdase DegS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTGCTCG CACTGATGTT CATCGTGGCG ACGCTCAAGC CGCAGTGGCT CCAACGGCAG
GGCCAGCTCG GCAAACAGCT CGCTGCGCCG ATCGTCGCGC TGCGGGAAGT CGCGCCCGGC
GTCGGCGGCG CGCCCGCTCA ATCCTCGTAC GCGGATGCCG CGCAAAAGGC AATGCCCGCG
GTCGTCAACG TATTCTCCAG CAAGGACGGC TCGCTGCCGC CCGATCCGCG CGCGAAGGAC
CCGCTCTTTC GCTATTTCTT CGGCGACCGC AACGCGCGCC GGCAGCAGGA GGAGCCCGCG
GCCAATCTGG GGTCGGGCGT CATCGTAAGC TCGGAGGGTT ACATTCTAAC GAACCAGCAC
GTCGTCGACG GCGCGGACCA GATCGAAGTC GCGCTCGCCG ACGGCCGCAC GGCCACCGCG
AAGGTGATCG GCAGCGATCC GGAAACCGAC CTCGCGGTGC TCAAGATCAA CATGACGAAT
CTGCCGACGA TCACGCTCGG CCGCTCGGAC CAGGCGCGGG TCGGCGACGT CGTGCTCGCG
ATCGGCAACC CGTTCGGCGT CGGCCAGACG GTCACGATGG GGATCATCAG CGCGCTCGGG
CGCAACCACC TCGGCATCAA CACGTTCGAG AACTTCATCC AGACCGACGC GCCGATCAAT
CCGGGCAACT CGGGCGGCGC GCTCGTCGAC GTGAACGGCA ACCTGCTCGG CATCAACACG
GCGATCTACT CGCGCTCGGG CGGCTCGCTC GGCATCGGCT TCGCGATCCC CGTATCGACC
GCGCGCAACG TGCTCGAAAG CATCATCACG ACGGGCGCCG TCACGCGCGG ATGGATCGGC
GTCGAGCCGC AGGACGTGAC GCCGGAAATC GCCGAGTCGT TCAGCCTCGC GCAAAAATCG
GGCGCGATCG TCGCGGGCGT GTTGCAGGGC GGCCCGGCCG ACAAGGCGGG AATCAAGCCG
GGCGACATTC TCGTGTCGAT CGACGACGAG GAAATCACCG ATACGACGAA GCTGCTGAAC
GTCGTCGCGC AGATCAAGCC CGGCACGCCG GCGAAGGTTC ATGTCGTGCG CAAGGGCAAG
GAGTTCGATG TGACGGTCGT GATCGGCAAG CGGCCGCCGC CACCGAAACA GGCGCTCGAC
GATCAGAACA GCGACGAGGA GTAA
|
|---|
| Protein sequence | MLLALMFIVA TLKPQWLQRQ GQLGKQLAAP IVALREVAPG VGGAPAQSSY ADAAQKAMPA
VVNVFSSKDG SLPPDPRAKD PLFRYFFGDR NARRQQEEPA ANLGSGVIVS SEGYILTNQH
VVDGADQIEV ALADGRTATA KVIGSDPETD LAVLKINMTN LPTITLGRSD QARVGDVVLA
IGNPFGVGQT VTMGIISALG RNHLGINTFE NFIQTDAPIN PGNSGGALVD VNGNLLGINT
AIYSRSGGSL GIGFAIPVST ARNVLESIIT TGAVTRGWIG VEPQDVTPEI AESFSLAQKS
GAIVAGVLQG GPADKAGIKP GDILVSIDDE EITDTTKLLN VVAQIKPGTP AKVHVVRKGK
EFDVTVVIGK RPPPPKQALD DQNSDEE
|
|---|
| |