| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I2968 |
|---|
| Symbol | |
|---|
| ID | 3847742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | + |
|---|
| Start bp | 3415532 |
|---|
| End bp | 3416317 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637842636 |
|---|
| Product | ompA family protein, putative |
|---|
| Protein accession | YP_443475 |
|---|
| Protein GI | 83720562 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3455] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.522224 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTACG CGCCTTCCCT CTTCGGCGGC AACACGCCGC CTCCCGCGCC GCACACGGTG
TCGTCGACCG ACGCCGGCTT CCAGGCACGC TCGCTCGTCG ATCTGCTGTA CGACGGCTTC
TTCATGCTGT TCCTGCTGAA GAACGGCCGC GAACCGAACG ACGCGTCGGA ATTCAGCACG
CGCATTCAGG AGTTCCTGGG CGAATTCGAG CGCGGCGCGA AGAAGCTCAA CATCGCCGCC
GACGACGTCT ACGCGGCGAA GTTCGCGTTT TGCGCGGCGA TCGACGAATC GGTGCTGTCG
TCGCAGTTCA AGATCCGCGC GGATTGGGAA CGCCGGCCGC TGCAACTCGT GCTGTTCGGC
GAACAGCTTG CGGGCGAGAA GTTCTATCAG TACCTCGAAG AATGCCGCGC GCAGGGCGCG
GCACGGCTGC AGTCGCTCGA GGTGTTCCAT ATGTGCCTGC TGCTCGGCTT CCAGGGCAAG
TATCTGCTCG AAGGGCCGGA GAAGCTCGCG TATCTGACCG CGCGGCTCGG CGACGAGATC
GCGAACATGA AGGGCAAGCG CGCGCCGTTC GCGCCGCATT GGCCACTTCC GGATCAGATC
TCGCACCGGC TCAAGCGCGA GGTGCCGCTG TGGGCGATCG GGGCGGTGTT CGCGCTCGTC
GGGCTGCTGG CGTTCGTCGG GTTGAATACG TATTTGAAGG ACAGCACCGT GCGGGCGCTC
GCGCCTTATT CGCAGGTCAT CAAGGTTGGG CCGGAGTCGG CTAATTTGAC GATTTCGTTG
CCTTGA
|
|---|
| Protein sequence | MSYAPSLFGG NTPPPAPHTV SSTDAGFQAR SLVDLLYDGF FMLFLLKNGR EPNDASEFST
RIQEFLGEFE RGAKKLNIAA DDVYAAKFAF CAAIDESVLS SQFKIRADWE RRPLQLVLFG
EQLAGEKFYQ YLEECRAQGA ARLQSLEVFH MCLLLGFQGK YLLEGPEKLA YLTARLGDEI
ANMKGKRAPF APHWPLPDQI SHRLKREVPL WAIGAVFALV GLLAFVGLNT YLKDSTVRAL
APYSQVIKVG PESANLTISL P
|
|---|
| |