Gene BTH_I2962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_I2962 
Symbol 
ID3848445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007651 
Strand
Start bp3409765 
End bp3410268 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content61% 
IMG OID637842630 
Producthypothetical protein 
Protein accessionYP_443469 
Protein GI83721066 
COG category[S] Function unknown 
COG ID[COG3157] Hemolysin-coregulated protein (uncharacterized) 
TIGRFAM ID[TIGR03344] type VI secretion system effector, Hcp1 family 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTACATA TGCATTTGAA GTTCGGTAGT CCCGCCATCA AGGGCGAGTC CGCCGACAAG 
GACCACGAAG GCTGGATCGA ACTGAAATCC TGGGATCACT CGATCGTTCA GCCGCGTTCG
GCAACCGCGT CGACCGCGGG CGGCCACACG GCAACGCGTT GCGAGCACGG CGACATGGTG
TTCACGAAGG AAATCGATTC GTCGAGCCCG CTGCTGTATC AGCACGCGTC GGGCGGCACC
ACGTTCGACG AGGTGACGGT CGATTTCCTG CGCGCGGATG GCGAAGGCCA GCGCGTCAAG
TACCTCGAGA TCAAGCTGAA GTACGTGATC ATCTCGAGCA TCGCGCCGAG CGTGCACAAC
GAAGGCCTGC CGCTCGAGAC CTTCTCGCTG AAGTACGCCG CGGTTCAGTG GAAGCAGACC
CAGCAGAAGA TCGGCGGCAA CCAGGGCGGC AACACGCAGG GCGCCTGGAG CCTCACGAAG
AACGACAAGA CCTACGCGGT CTAA
 
Protein sequence
MLHMHLKFGS PAIKGESADK DHEGWIELKS WDHSIVQPRS ATASTAGGHT ATRCEHGDMV 
FTKEIDSSSP LLYQHASGGT TFDEVTVDFL RADGEGQRVK YLEIKLKYVI ISSIAPSVHN
EGLPLETFSL KYAAVQWKQT QQKIGGNQGG NTQGAWSLTK NDKTYAV