| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I2916 |
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| Symbol | |
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| ID | 3846801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007651 |
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| Strand | - |
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| Start bp | 3350818 |
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| End bp | 3352590 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637842584 |
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| Product | PDZ domain-containing protein |
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| Protein accession | YP_443423 |
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| Protein GI | 83719044 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGCTCA CGCTCGCCGA TCCCGATCCG GCCGGTCAGC GCTTTGCGCT GCCCGCATGG
ATTCCGGGCA GCTACATGGT GCGCGAGTTC GCGCGCAACA TCGTGACGCT GCGCGCGTTC
AACGACGCGG GCCGCAGGTT GCGGATCGGC AAGCTCGACA AGCACACCTG GCAGGCCGCG
CCGTCGCCCG GAGCGATCAC GCTGCGCTAC GACGTCTACG CATGGGATCT GTCGGTGCGC
GCCGCGCATC TCGACGACAC GGGCGGCTTC TTCAACGGCA CGAGCGTGTT TCTCGCGCCG
CTCGGCCACG AGGACGCGCC GTGCGAGGTG ATGATCGAGC GCCCGGCGGG CGACGCGTAC
CGGCGCTGGC GCGTCGCCAC CGCGCTGCCG GAGGCGCGCG GCACGAAGCG CTACGGCTTC
GGCGCGTACC GCGCGCAGAA CTACGACGAG CTGATCGACC ATCCGGTCAC GCTCGGCGAG
TTCGCGCTCG CGTCGTTCGA CGCGCACGGC GTGCCGCACG ACATCGCGAT CGCGGGCCGC
GTGACCGGGC TCGATCTCGA GCGGCTGGCG GCCGACCTGA AGCGCGTGTG CGAAGCGCAG
ATCGCGCTGT TCGAGCCGAA GACGAAGCGC GCGCCGATGT CGCGCTACGT GTTCATGACG
CAGGCCGTCA GCGACGGCTA CGGCGGGCTC GAGCATCGCG CGTCGACGGC GCTCGTCTGC
AATCGCACCG ACCTGCCGGT GAAGGGGCGC ACGGAGAAGA CGGAGGGCTA TCGGACCTAT
CTCGGCCTGT GCAGCCACGA GTATTTCCAC ACGTGGAACG TAAAGCGGAT CAAGCCGGCC
GCATTCGCGC CGTACGACCT GTCGCGGGAG AACCATACGT CGCTGCTGTG GCTCTTCGAG
GGCTTCACGT CGTACTACGA CGACCTGATG CTCGTGCGCA GCGGCCTGAT CTCGCAAGAC
GACTACTTCG CGCTCGTCGG CCGCACGATC GCCGGCGTGC AGCGCGGCGC CGGCCGGCTC
AAGCAGAGCG TCGCCGAAAG CTCGTTCGAC GCATGGATCA AGTATTACCG GCAGGACGAG
AACGCGACGA ACGCGATCGT CAGCTATTAC ACGAAGGGCT CGCTTGTCGC GCTCGCGTTC
GATCTGGCGA TCCGCGCGCG GACCCGCCAC CGCAAGTCGC TCGACGACGT GATGCGGTTC
TTGTGGCAGC GGTTCGGGCG CGACTTCTAC GACGGCAAGC CGAACGGCGT CGGCGAGGGC
GACGTGAAGG CGCTGATCGC CGAGGCGACG GGCGTCGATC TCGGCCGCCT CTTCGACGAT
GCGGTGTCCG GCACGCGCGA TCTGCCGCTG GCCGCGCTCC TCGAGCCGTT CGGCGTGACG
CTCGCGCCGG ACGCGGGCGC GAACGGCTCG GCCGACGCGC CCCCGAAGCC GACGCTCGGC
GCGCGCACCC GGGGCGGCGC GGAATGCACG CTCGCGGCCG TCTACGAAGG CGGCGCCGCG
CATCGGGCGG GGCTGTCCGC GGGCGATGCG CTCGTCGCGA TCGACGGGCT GCGCGTGACG
GGCTCGAACC TCGACGCGCT GCTCGCGCGC TACCGGGTCG GCGACAAGGT CGAGATCCAC
GCGTTCCGGC GCGACGAGCT GCGCGTCGCG CATCTCAAGC TCGACGGCCC GGACATCGCG
CGCTACAAAC TGACGGCGCA GCCGAAACCC GCGGCGACGC GCGCCCGCCG CGACGCGTGG
CTCGGGTTGC CGGCGGCGCG CGGCCGCCGA TAA
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| Protein sequence | MTLTLADPDP AGQRFALPAW IPGSYMVREF ARNIVTLRAF NDAGRRLRIG KLDKHTWQAA
PSPGAITLRY DVYAWDLSVR AAHLDDTGGF FNGTSVFLAP LGHEDAPCEV MIERPAGDAY
RRWRVATALP EARGTKRYGF GAYRAQNYDE LIDHPVTLGE FALASFDAHG VPHDIAIAGR
VTGLDLERLA ADLKRVCEAQ IALFEPKTKR APMSRYVFMT QAVSDGYGGL EHRASTALVC
NRTDLPVKGR TEKTEGYRTY LGLCSHEYFH TWNVKRIKPA AFAPYDLSRE NHTSLLWLFE
GFTSYYDDLM LVRSGLISQD DYFALVGRTI AGVQRGAGRL KQSVAESSFD AWIKYYRQDE
NATNAIVSYY TKGSLVALAF DLAIRARTRH RKSLDDVMRF LWQRFGRDFY DGKPNGVGEG
DVKALIAEAT GVDLGRLFDD AVSGTRDLPL AALLEPFGVT LAPDAGANGS ADAPPKPTLG
ARTRGGAECT LAAVYEGGAA HRAGLSAGDA LVAIDGLRVT GSNLDALLAR YRVGDKVEIH
AFRRDELRVA HLKLDGPDIA RYKLTAQPKP AATRARRDAW LGLPAARGRR
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