| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I2871 |
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| Symbol | |
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| ID | 3846964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007651 |
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| Strand | + |
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| Start bp | 3304017 |
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| End bp | 3305759 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637842539 |
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| Product | EAL domain-containing protein |
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| Protein accession | YP_443383 |
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| Protein GI | 83718429 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGCGC GCGCCGGTAC GCCGCGCGCC GATGATACGG TTCGAAGCTG GCTGGAACAA
ACCGTCGGTG CGGTCGATTT CCTCGCTCAT GTGGATCGCG ATCTGCGCTT CCTGTACGTG
TCGGACGCGA GCCTTCGCTT CATCGGCTAT CACCGCGACT ATCTGCACAC GCTGACGCTG
CGCGACCTGA TCCCCGAACA GGATACCGCG ACGCTCGACG GCCTGCTCGC GCGCGCATCG
GAGACGGGCG ACATCGAGAA GGCGACGCTG TGTCTCGTGA AATCGCTGAC CTACCCGCTC
GACGTCGAGG TGCGCGCGGT GCGCAGCCGC CACCACGGCG TCGACGGCTT CGCGATCGCC
GCGTTCGACG TGTCGTCGTG GCGTGCGATC GAGGCGCGGC TCACGTACGA GCTGCATCAC
GATCCGATGA CGGGGCTCGA CAACCTGTCG GCGCTCCTGC CCGCGCTGAT GCGCGCGCAG
CAGATCGCGG ACGAAGGCGG CGGCTGCACG GCGCTGCTGC TGCTCGATCT CGACGACTAC
CAGCGGATCA ATCGCGCGCT CGGCTACGAC GCGGGCGACG CGCTGCTGCG CGACACCGCG
CAGCGGCTGC AGCGGCTCGC GACGCGCGGC GAGCGGCTCG CGCGCGTCGC AAGCGACAAG
TTCGCGGTGA TGCTGAGCGC GCCCACGCGC ATTGCCGCGA TCGACGCGGC CGAAGCGCTC
GCGCGCCAGT TGCAGACGGC CGTCCAGCGG CCGTACGCGT ACGACGGGCA GGCGGTGCAC
CTGTCGGCGA GCGTCGGCAT CGCGATCTAT CCTGATGCGC GCGCCGCGTC GAAGCACGCG
CAGCACCACA GTCCGCTGTT GCGGCGCGCG GACCGCGCGC TCGCGCAGGC GAAGGCGGCG
GGCGGCAACG CGCTCGCGTT CCACCAGCCG ACCGACGATC CGGCCGACGC CGAGCGCCTG
AAGCTCGAGG CCGATCTCTA CAACGGCGTG CGCAACGGCG AATTCTCGCT GCATTTCCAG
CCGATCACGA AGAGCCACTC GGGCGCCGTG GTCGGCGTCG AGGCGCTGAT CCGCTGGCAC
CATCCGGTGC ACGGGCTCGT CGCGCCCGCG ACGTTCATCC CGCTCGCCGA ATCGATCGGC
CTCATCAACT ATCTCGGCAA CTGGGTGCTG AAAGCCGCGT GCATGCAACT CGTGTCGTGG
GACCGGCAAG GGATCGCGCT GCAGTACGTG GCCGTCAACG TGTCGCCGCA GCAGTTCCGC
GATCCGCGCT TCACGCAGAG CGTGCGCGAC GCGATCAAGC TGACGGGCAT CGACCCGCGC
CGGATCGTGC TTGAGATCAC CGAAAGCCTG CTGATGCACG ATCCGAATCA CGCGAAGACG
CTGCTCGAGG AAGTGACCGA GCTCGGCATC CGGTTCGCGG TCGACGATTT CGGCACCGGC
TATTCGAGCC TCGCATACCT GCAGAGCTTC CCGCTCGCGA AACTGAAGAT CGACCGCAGT
TTCGTCGAAA ATCTGTTGAC GTCGAGAAAC GACCGCGCGA TCGTGTCGGC GGTCGTCGGC
CTCGCGCAGA CGCTCGAGCT CGAGCTCGTC GCGGAGGGCG TCGAGACCGA GGCGCAGCGC
ACGCTGCTGA CCGAGATGGG CTGCAACCAC ATTCAAGGCT GGCTCGTCTG CCAAGCGCTG
CCGTCGGACG AACTCGCGCA ACGCTTCGAG GCGCAGGAGC TCCATCTGCA CGCAACCGCA
TGA
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| Protein sequence | MPARAGTPRA DDTVRSWLEQ TVGAVDFLAH VDRDLRFLYV SDASLRFIGY HRDYLHTLTL
RDLIPEQDTA TLDGLLARAS ETGDIEKATL CLVKSLTYPL DVEVRAVRSR HHGVDGFAIA
AFDVSSWRAI EARLTYELHH DPMTGLDNLS ALLPALMRAQ QIADEGGGCT ALLLLDLDDY
QRINRALGYD AGDALLRDTA QRLQRLATRG ERLARVASDK FAVMLSAPTR IAAIDAAEAL
ARQLQTAVQR PYAYDGQAVH LSASVGIAIY PDARAASKHA QHHSPLLRRA DRALAQAKAA
GGNALAFHQP TDDPADAERL KLEADLYNGV RNGEFSLHFQ PITKSHSGAV VGVEALIRWH
HPVHGLVAPA TFIPLAESIG LINYLGNWVL KAACMQLVSW DRQGIALQYV AVNVSPQQFR
DPRFTQSVRD AIKLTGIDPR RIVLEITESL LMHDPNHAKT LLEEVTELGI RFAVDDFGTG
YSSLAYLQSF PLAKLKIDRS FVENLLTSRN DRAIVSAVVG LAQTLELELV AEGVETEAQR
TLLTEMGCNH IQGWLVCQAL PSDELAQRFE AQELHLHATA
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