| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I2868 |
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| Symbol | |
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| ID | 3848316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007651 |
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| Strand | + |
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| Start bp | 3298629 |
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| End bp | 3301931 |
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| Gene Length | 3303 bp |
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| Protein Length | 1100 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637842536 |
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| Product | AcrB/AcrD/AcrF family protein |
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| Protein accession | YP_443380 |
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| Protein GI | 83721112 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.818421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTGT CGCGCCCGTT CATCACCCGC CCCGTCGCGA CGACGCTGCT CGCGCTCGGG
ATCGCGCTCG CCGGCCTGTT CGCGTTCATC AAGCTGCCCG TGTCACCGCT GCCGCAGGTC
GATTTCCCGA CGATCCTCGT GCAGGCGTCG CTGCCCGGCG CGAGCCCGGA AACCGTCGCG
ACCAGCGTGA CGAGCCCGCT CGAGCGGCAT CTGGGCTCGA TCGCGGACGT CGCCGAGATG
ACGTCGATGA GCTCGGTCGG CAACGCGCGG ATCGTGCTGC AGTTCAACCT GAACCGCGAC
ATCGACGGCG CCGCACGCGA CGTGCAGGCC GCGATCAACG CCGCGCGCGC GGATCTGCCC
GCGAGCCTGA AGAGCAACCC GACGTACCGC AAGGTCAACC CGGCCGATTC GCCGATCATG
GTCGTGTCGC TCACGTCGAA GACGGCGTCG CCCGCGAAGC TGTACGACGC CGCGTCGACG
GTGCTCCAGC AGTCGCTCTC GCAAATCGAC GGCATCGGCC AGGTCAGCCT GAGCGGCTCG
GCGAACCCGG CCGTGCGCGT CGAGCTCGAG CCGCAGGCGC TGTTCCACTA CGGGATCGGC
CTCGAGGACG TGCGCGCCGC GCTCGCGTCG GCGAACGCGA ACAGCCCGAA GGGCGCGATC
GAGACCGGTC CGCACCACTA TCAGCTGTAC ACGAACGACC AGGCGTCGAA GGCCGCGCAG
TACAAGGACC TCGTGATCGC GTACCGCAAC AACGCGGCCG TGAGCCTGTC CGACGTGTCG
AGCGTCGTCG ACTCGGTCGA GGATCTGCGC AACCTCGGCC TGATGAACGG CGAGCGCGCG
GTGCTCGTGA TCCTGTACCG CTCGCCCGGC GCGAACATCA TCGATACGAT CGAGCGCGTG
AAGGCCGCGC TGCCGCAGCT GACGGCCGCG CTGCCCGCCG ACATCCAGGT CACGCCCGTG
CTCGACCGCT CGCGCACGAT CCGCGCGTCG CTCGCCGACA CCGAGCACAC GCTGCTCATC
GCGGTGAGCC TCGTCGTGAT GGTCGTGTTC CTGTTCCTGC GCAACTGGCG CGCGACGCTG
ATCCCGAGCG TCGCGGTGCC GATCTCGATC GTCGGCACGT TCGGCGCGAT GTATCTGCTC
GGCTTCTCGC TGAACAACCT GTCGCTGATG GCGCTCATCG TCGCGACGGG CTTCGTCGTC
GACGACGCGA TCGTCGTGCT CGAGAACATC GCGCGCCACA TCGAGAACGG CACGCCGCGG
CTGCAGGCCG CGTTCGACGG CGCGCGCGAG GTGGGCTTCA CGGTGCTGTC GATCAGCCTG
TCGCTCGTCG CGGTGTTTCT GCCGATCCTG CTGATGGGCG GCATCGTCGG GCGCCTGTTC
CGCGAATTCG CGCTCACGCT GTCGCTCGCG ATCGCCGTGT CGCTCGTCGT GTCGCTCACG
CTCACGCCGA TGATGTGCGC GCGCCTGCTG CCCGAAGCGC ACGATCCGCG CGAGGAGGGC
CACGTCGCGC GCTGGCTCGA GCGCGGCTTC GAATGGATGC AGCGCGGCTA CGAGCGCACG
CTGTCGTGGG CGCTGCGCCA TCCGTTCACG GTCCTGATGA CGCTCGTCGC GACGATCGCG
CTGAACATCG CGCTGTACAT CGTCGTGCCG AAGGGCTTCT TCCCGCAGCA GGACACAGGC
CTCATGATCG GCGGCATCCA GGCCGACCAG ACGACGTCGT TCCAGGCGAT GAAGCTCAAG
TTCACCGAGA TGATGCGCAT CGTCCGCGAG AATCCGAACG TCGCGAACGT CGCGGGCTTC
ACGGGCGGCG CGCAGACGAA CTCGGGCTTC ATGTTCGTCG CGCTGAAGGA CAAGCCGCAG
CGCAAGCTGT CGGCCGATCA GGTGATCCAG CAACTGCGGC CGCGGCTCGC CGAGGTCGCG
GGCGCGCGCA CGTTCCTGCA GGCCGCGCAG GACATCCGCG CGGGCGGCCG GCAGAGCAAC
GCGCAGTATC AGTTCACGCT GCTCGGCGAT TCGACGGCCG AGCTGTACAA GTGGGCGCCG
ATCCTGACCG AGGCGCTGCA AAAGCGCCCC GAGCTCGCCG ACGTGAACTC CGATCAGCAG
CAAGGCGGCC TCGAGGCGAT GGTGACGATC GACCGCGCGA CGGCCGCGCG CCTCGGCATC
AAGCCGGCGC AGATCGACAA CACGCTGTAC GACGCGTTCG GCCAGCGCCA GGTGTCGACG
ATCTACAACC CGCTCAACCA GTACCACGTC GTGATGGAAG TCGCGCCGCA GTACTGGCAG
AGCCCGGAGA TGCTCAAGCA GATATACATC AGCACGTCGG GCGGCAGCGC GAGCGGCGCG
CAGACGACGA ACGCGGCGGC AGGCACCTAC GTCGCGGCCA CGGCCCGCGC GTCGACGGCC
GGCGCGGCCG CGCAGAGCGC CGCCGCGATC GCCGCCGATT CGGCGCGCAA CCAGGCGCTC
AACTCGATCG CGTCGAGCGG CAAGTCGGGC GCGTCGTCGG GCGCGGCGGT GTCGACGTCG
AAATCGACGA TGGTGCCGCT TTCCGCGATC GCGAGCTTCG GGCCGAGCAC GACGCCGCTC
GCGGTCAACC ACCAGGGCCT GTTCGTCGCG ACGACGATTT CGTTCAACCT GCCGCCCGGC
GTGTCGCTGT CGAAGGCGAC GCAGGCGATT TACCAGACGA TGGCCGAAGC CGGCGTGCCG
CCGACGATCC AGGGCAGCTT CCAGGGCACC GCGCAGGCGT TCCAGCAATC GCTGAAGGAT
CAGCCGATCC TGATCCTCGC GGCGCTCGCG GCCGTCTACA TCGTGCTCGG GATACTGTAC
GAGAGCTACA TCCATCCGGT CACGATCCTG TCGACGCTGC CGTCGGCGGG CGTCGGCGCC
CTCCTCGGCC TGCTGCTGTT CAAGACCGAG TTCAGCATCA TCGCGCTGAT CGGCGTGATC
CTGCTCATCG GCATCGTGAA GAAGAACGCG ATCATGATGG TCGACTTCGC GATCGACGCG
TCGCGGCAAG GCAAATCGTC GTTCGACGCG ATCCACGAAG CATGTCTGCT GCGCTTCCGG
CCGATCATGA TGACGACGAT GGCGGCGCTG CTCGGCGCGC TGCCGCTCGC GTTCGGCAGC
GGCGACGGCG CCGAGATGCG CGCGCCGCTC GGGATCGCGA TCGCGGGCGG GCTCATCGTG
TCGCAAATGC TGACGCTCTA TACGACGCCC GTCGTCTATC TATACATGGA CCGGCTGCGC
GTTTGGGCCG AGAAGCGCCG CCATCGCCGG GCGTCGGGCG GCGCGGCGGT CGCGGGCGAG
TGA
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| Protein sequence | MNLSRPFITR PVATTLLALG IALAGLFAFI KLPVSPLPQV DFPTILVQAS LPGASPETVA
TSVTSPLERH LGSIADVAEM TSMSSVGNAR IVLQFNLNRD IDGAARDVQA AINAARADLP
ASLKSNPTYR KVNPADSPIM VVSLTSKTAS PAKLYDAAST VLQQSLSQID GIGQVSLSGS
ANPAVRVELE PQALFHYGIG LEDVRAALAS ANANSPKGAI ETGPHHYQLY TNDQASKAAQ
YKDLVIAYRN NAAVSLSDVS SVVDSVEDLR NLGLMNGERA VLVILYRSPG ANIIDTIERV
KAALPQLTAA LPADIQVTPV LDRSRTIRAS LADTEHTLLI AVSLVVMVVF LFLRNWRATL
IPSVAVPISI VGTFGAMYLL GFSLNNLSLM ALIVATGFVV DDAIVVLENI ARHIENGTPR
LQAAFDGARE VGFTVLSISL SLVAVFLPIL LMGGIVGRLF REFALTLSLA IAVSLVVSLT
LTPMMCARLL PEAHDPREEG HVARWLERGF EWMQRGYERT LSWALRHPFT VLMTLVATIA
LNIALYIVVP KGFFPQQDTG LMIGGIQADQ TTSFQAMKLK FTEMMRIVRE NPNVANVAGF
TGGAQTNSGF MFVALKDKPQ RKLSADQVIQ QLRPRLAEVA GARTFLQAAQ DIRAGGRQSN
AQYQFTLLGD STAELYKWAP ILTEALQKRP ELADVNSDQQ QGGLEAMVTI DRATAARLGI
KPAQIDNTLY DAFGQRQVST IYNPLNQYHV VMEVAPQYWQ SPEMLKQIYI STSGGSASGA
QTTNAAAGTY VAATARASTA GAAAQSAAAI AADSARNQAL NSIASSGKSG ASSGAAVSTS
KSTMVPLSAI ASFGPSTTPL AVNHQGLFVA TTISFNLPPG VSLSKATQAI YQTMAEAGVP
PTIQGSFQGT AQAFQQSLKD QPILILAALA AVYIVLGILY ESYIHPVTIL STLPSAGVGA
LLGLLLFKTE FSIIALIGVI LLIGIVKKNA IMMVDFAIDA SRQGKSSFDA IHEACLLRFR
PIMMTTMAAL LGALPLAFGS GDGAEMRAPL GIAIAGGLIV SQMLTLYTTP VVYLYMDRLR
VWAEKRRHRR ASGGAAVAGE
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