| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I2867 |
|---|
| Symbol | |
|---|
| ID | 3849467 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | + |
|---|
| Start bp | 3295518 |
|---|
| End bp | 3298628 |
|---|
| Gene Length | 3111 bp |
|---|
| Protein Length | 1036 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637842535 |
|---|
| Product | AcrB/AcrD/AcrF family protein |
|---|
| Protein accession | YP_443379 |
|---|
| Protein GI | 83721292 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCGT CCCGCATCTT CATCCTTCGC CCGGTCGGCA CCGCGCTCCT GATGGCGGCG
ATCATGCTCG CCGGCCTCGT CGCGCTGCGC TTCCTGCCGC TCGCGGCGCT GCCCGAGGTC
GACTATCCGA CGATCCAGGT CCAGACCTTC TATCCGGGCG CGAGCCCCGA AGTGATGACG
TCGTCCGTCA CCGCGCCGCT CGAGCGGCAA TTCGGGCAGA TGCCGTCGCT CAACCAAATG
TCGTCGCAAA GCTCGGCGGG CGCGTCCGTG ATCACGCTGC AGTTCAGCCT CGATCTGCCG
CTCGACATCG CCGAGCAGGA AGTGCAGGCG GCCATCAACG CGGCGGGCAA CCTGCTGCCG
TCGGACCTCC CCGCGCCGCC CATCTACGCG AAGGTCAATC CGGCCGACGC GCCCGTGATC
ACGCTCGCCG TCACGTCGAA GACGCTGCCG CTCACGCAGG TTCAGGATCT CGCGGACACG
CGGCTCGCGA TGAAGATCTC GCAGGTGTCG GGCGTCGGCC TGGTCAGCCT GTCGGGCGGC
AACCGGCCGG CCGTGCGGAT TCAGGCGAAC CCGCTCGCGC TCGCGTCGTA CGGCCTGAAT
CTCGACGACC TGCGCACGAC GATCTCGAAC CTGAACGTCA ACACGCCGAA GGGCAACTTC
GACGGCCCGA CGCGCGCGTA CACGATCAAC GCGAACGATC AATTGACGAG CGCCGACCAG
TACAACGACG CCGTCGTCGC GTACAAGAAC GGCCGGCCGG TGATGCTCAC CGACGTCGCG
AAGATCGTCG CCGGCTCGGA GAACACGAAG CTCGGCGCGT GGGTCGACGC CGAGCCCGCG
ATCATCCTGA ACGTGCAGCG CCAGCCGGGC GCGAACGTGA TCCAGACCGT CGACAACATC
AAGGCGATCC TGCCGAAGCT GCAGGAATCG CTGCCCGCCG CGCTCGACGT GCAGATCGTC
ACCGATCGCA CGACGATGAT CCGCGCCGCC GTGCGCGACG TGCAGTTCGA ACTCGGGCTC
GCGGTCGCGC TCGTCGTGCT CGTGATGTAC CTGTTCCTCG CGAACGTCTA TGCGACGATC
ATCCCGAGCC TGTCGGTGCC GCTGTCGCTG ATCGGCACGC TCGCGGTGAT GTACCTGTCG
GGCTTTTCGC TGAACAACCT GTCGCTGATG GCGCTCACGA TCGCCACGGG CTTCGTCGTC
GACGACGCGA TCGTGATGAT CGAGAACATC GCGCGCTACG TCGAGGAAGG CGATTCCGCG
CTCGAAGCGG CGTTGAAGGG CTCGAAGCAG ATCGGCTTCA CGATCATCTC GCTCACGGTG
TCGCTGATCG CCGTGCTGAT TCCGCTGCTC TTCATGGGCG ACGTCGTCGG GCGGCTGTTC
CACGAGTTCG CGATCACGCT CGCGGTGACG ATCGTGATCT CGGCCATCGT GTCGCTCACG
CTCGTGCCGA TGATGTGCGC GAAGCTGCTG CGCCACACGC CACCGCCCGA AAGCCACCGC
TTCGAGGCGA AGGTGCACGG GCTGATCGAC CGCGTGATCG CGCGCTACGG CGTCGCGCTC
GAGTGGGTGC TCGACCGGCA GCGCTCGACG CTCGTCGTCG CGGTGCTGAC GCTCGCGCTC
ACCGCCCTCC TCTACGTCGT GATTCCGAAG GGCTTCTTCC CGACGCAGGA CACGGGCGTG
ATCCAGGCGA TCACGCAGGC GCCGCAATCG GTATCGTACG GCGCGATGGC CGAGCGTCAG
CAGGCGCTCG CCGCCGAGAT CCTGAAGAAC CCGGACGTCG TGAGCCTCAC GTCGTTCATC
GGCGTCGACG GCTCGAACAT CACGCTGAAC AGCGGCCGGA TGCTGATCAA CCTGAAGCCG
CGCGACGACC GCAGCGAATC GGCGAGCGAC GTGATCCGCT CGCTGCAGCA GCAGGTCGCG
GCGGTCACGG GCATTTCGCT GTACATGCAG CCGGTGCAGG ATCTGACGAT CGATTCGACG
GTGAGTCCGA CGCAGTATCA GTTCATGCTG ACGAGCCCGA ACCCGGACGA GTTCGCGACC
TGGGTGCCGA AGCTCGTCGA CCGGCTGAAG CAGGAGCGCT CGCTCGCCGA CGTCGCGACC
GATCTGCAGA ACAACGGCAA GTCGGTCTAC ATCGAGATCG ACCGCGCGAG CGCCGCGCGC
TTCGGGATCA CGCCCGCGAC CGTCGACAAC GCGCTCTACG ACGCATACGG CCAGCGAATC
GTGTCGACGA TCTTCACGCA GTCGAACCAG TACCGCGTGA TCCTCGAATC GGAGCCGCAG
ATGCAGCACT ACACCGATTC GCTGAACGGC ATCTACCTGC CGTCGGCGGG CGGCGGGCAG
GTGCCGCTCT CGGCGATCGC GACGTTCCAC GAGCGGCCGG CGCCGCTGCT CGTGTCGCAC
CTGTCGCAGT TCCCGGCGGC GACGATCTCA TTCAACCTCG CGCCGGGCGC GTCGCTCGGC
GAGGCGGTGA AGGCGATCGA CGCGGCCGAG CGCGAGCTCG GCCTGCCGGC GTCGTTCCAG
ACGCGCTTCC AGGGCGCGGC GCTCGCGTTC CAGGCGTCGC TGTCGAACCA GCTGTTCCTG
ATCCTCGCCG CGATCGTCAC GATGTACATC GTGCTCGGCG TGCTGTACGA GAGCTACATC
CATCCGATCA CGATCCTGTC GACGCTGCCG TCGGCGGGCG TCGGCGCGCT GCTCGCGCTG
ATGATCACCG GGCACGACCT CGACATCATC GGCATCATCG GCATCGTGCT GCTGATCGGC
ATCGTGAAGA AGAACGCGAT CATGATGATC GACTTCGCGC TCGAGGCGGA ACGCGTCGAG
GGCAAGCCGC CGCGCGAGGC GATCTACCAG GCGTGCCTGC TGCGCTTTCG GCCGATCCTG
ATGACGACGC TCGCCGCGCT CCTGGGCGCC GTGCCGCTCA TCGCCGGCTC GGGCGCGGGC
TCCGAGCTGC GCCAGCCGCT CGGCATCGCG ATCGCGGGCG GGCTCATCGT GTCGCAGGTG
CTCACGCTCT TCACGACGCC CGTGATCTAC CTCGGCTTCG ACGCGCTCGC GCGCCGCATC
CGCGGCTTCT TCGAGCGCTC CGGCCGGCGG GCCGCGCATC CGGACGCGTA A
|
|---|
| Protein sequence | MNPSRIFILR PVGTALLMAA IMLAGLVALR FLPLAALPEV DYPTIQVQTF YPGASPEVMT
SSVTAPLERQ FGQMPSLNQM SSQSSAGASV ITLQFSLDLP LDIAEQEVQA AINAAGNLLP
SDLPAPPIYA KVNPADAPVI TLAVTSKTLP LTQVQDLADT RLAMKISQVS GVGLVSLSGG
NRPAVRIQAN PLALASYGLN LDDLRTTISN LNVNTPKGNF DGPTRAYTIN ANDQLTSADQ
YNDAVVAYKN GRPVMLTDVA KIVAGSENTK LGAWVDAEPA IILNVQRQPG ANVIQTVDNI
KAILPKLQES LPAALDVQIV TDRTTMIRAA VRDVQFELGL AVALVVLVMY LFLANVYATI
IPSLSVPLSL IGTLAVMYLS GFSLNNLSLM ALTIATGFVV DDAIVMIENI ARYVEEGDSA
LEAALKGSKQ IGFTIISLTV SLIAVLIPLL FMGDVVGRLF HEFAITLAVT IVISAIVSLT
LVPMMCAKLL RHTPPPESHR FEAKVHGLID RVIARYGVAL EWVLDRQRST LVVAVLTLAL
TALLYVVIPK GFFPTQDTGV IQAITQAPQS VSYGAMAERQ QALAAEILKN PDVVSLTSFI
GVDGSNITLN SGRMLINLKP RDDRSESASD VIRSLQQQVA AVTGISLYMQ PVQDLTIDST
VSPTQYQFML TSPNPDEFAT WVPKLVDRLK QERSLADVAT DLQNNGKSVY IEIDRASAAR
FGITPATVDN ALYDAYGQRI VSTIFTQSNQ YRVILESEPQ MQHYTDSLNG IYLPSAGGGQ
VPLSAIATFH ERPAPLLVSH LSQFPAATIS FNLAPGASLG EAVKAIDAAE RELGLPASFQ
TRFQGAALAF QASLSNQLFL ILAAIVTMYI VLGVLYESYI HPITILSTLP SAGVGALLAL
MITGHDLDII GIIGIVLLIG IVKKNAIMMI DFALEAERVE GKPPREAIYQ ACLLRFRPIL
MTTLAALLGA VPLIAGSGAG SELRQPLGIA IAGGLIVSQV LTLFTTPVIY LGFDALARRI
RGFFERSGRR AAHPDA
|
|---|
| |