Gene BTH_I2793 details

Gene Information

• Locus tag: BTH_I2793
• ID: 3847570
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia thailandensis E264
• Kingdom: Bacteria
• Replicon accession: NC_007651
• Strand: +
• Start bp: 3207918
• End bp: 3209798
• Gene Length: 1881 bp
• Protein Length: 626 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637842461
• Product: proline/betaine transporter
• Protein accession: YP_443305
• Protein GI: 83719892
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2814] Arabinose efflux permease
• TIGRFAM ID: [TIGR00883] metabolite-proton symporter

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0377478
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGTCTC GTTCAACGGC CTACGCCTGT TTAATTATTT CGGTCACCCG ACCGTTCGGC 
CCTGTGCCGC GACTGGCCGT CCGGAATTTC GCTCACAAGG AAGCGTGCCT TCGGGCAGCT 
TTTTTCGTTT CGACGCCCTC CAAGGGCATT CAACCGGCCG CGCGCCACGC GACGTGCCGG 
TTCGCCGACC GTCCCCGTGC GGCGGTCTTT TCTCACGAGT GCAAGTGCGC GACGACCACC 
GGGTCCGCGC CGATCGGTTT CCGCCATGGA TTAAGCGCTT CATGCGCCCC GCTCACGCTC 
GCGACCCTTG TCCGATCGCG AGCCGCACTC TCCGGCAAAC CGTGGCGAAC CGCGCCCTGT 
CGCGCGATTC GGCCGCCGTC ACAGGAGTTT TCGACCTTGA CTGCAACACC CGCCCCCTCT 
ACCCCGTCCA TCGCGCCCGC CGAAGCGGCG CCCGCCGCCG CGCACGAAAT CACCGTCGTC 
GACCAGGGGC TCCTGAAACG CGCCGTCGGC GCGATGGCGC TCGGCAACGC GATGGAATGG 
TTCGACTTCG GCGTCTACAG CTACATCGCC GTCACGCTCG GCCAGGTGTT CTTCCCGTCG 
AGCAGCCCGT CCGCGCAGTT GCTCGCGACG TTCGGCACGT TCGCCGCCGC ATTCCTCGTG 
CGCCCGCTCG GCGGAATGGT GTTCGGCCCG CTCGGCGACC GCATCGGCCG CCAGCGCGTG 
CTCGCGATGA CGATGATCAT GATGGCCGTC GGCACGTTCG CGATCGGCCT CATCCCGAGC 
TACGACTCGA TCGGCCTGCT CGCGCCCGCG CTGCTCCTCG TCGCGCGCCT CGTGCAGGGC 
TTCTCGACGG GCGGCGAATA CGGCGGCGCG GCGACCTTCA TCGCCGAGTT CTCGACCGAC 
AAGCGCCGCG GCTTCATGGG CAGCTTCCTA GAGTTCGGCA CGCTGATCGG CTATGTGATG 
GGCGCGGGCG TCGTCGCGCT GCTGACCGCC TCGCTGTCGC ACGACGCGCT GCTGTCGTGG 
GGCTGGCGCG TGCCGTTCCT GATCGCCGGC CCGCTCGGCC TGATCGGCCT GTACATCCGG 
ATGAAGCTCG AAGAAACGCC CGCGTTCAAG CGCCAGGCCG AGGCGCGCGA AGCGCAGGAC 
AAGGCGGTGC CGAAAGCGCA TTTCCGTCGG CAGCTCGCAC GGCACTGGCG CGCGCTGCTG 
CTGTGCGTCG GACTCGTGCT GATCTTCAAC GTCACCGACT ACATGGCGCT GTCGTACCTG 
CCGAGCTATC TATCGTCGAC GCTGCATTTC GACGAGGCGC ACGGCCTCGT GCTGATCCTG 
ATCGTGATGG TGCTGATGAT GCCGATGACG CTCGCCACGG GCCGCCTGTC GGACGCCGTC 
GGCCGCAAGC CGGTGATGCT CGCCGGCTGC ATCGGCCTGT TCGCGCTCGC GATTCCCGCG 
CTGCTGCTGA TCCGCACGGG CGAGACGTCA CTCGTGTTCG GCGGCCTGCT GATCCTCGGC 
GCGCTGCTGT CGTGCTTCAC GGGCGTGATG CCGTCGGCGC TGCCGGCGCT CTTCCCGACC 
GAGATCCGCT ACGGCGCGCT CGCGATCGGC TTCAACGTGT CGGTGTCGCT GTTCGGCGGC 
ACGACGCCGC TCGCCGCCGC GTGGCTCGTC GACGCGACGG GCAACCTGAT GATGCCCGCG 
TACTATCTGA TGGGCGCGGC CGTGATCGGC GCGATCTCGG TGATGGCGCT GCCCGAGAGC 
GCGCGCCAGC CGCTCAAGGG CTCGCCGCCC GCCGTCGCGT CGCACCGCGA GGCGCATGCG 
CTCGCGCGCG AGATCAAGCG CCGCGAGGCG GCCGAGCGCG ACGACGGCGG CTATGCGAGC 
GCTGCGGCGC TGCGCGCGTG A 

 

Protein sequence

MLSRSTAYAC LIISVTRPFG PVPRLAVRNF AHKEACLRAA FFVSTPSKGI QPAARHATCR 
FADRPRAAVF SHECKCATTT GSAPIGFRHG LSASCAPLTL ATLVRSRAAL SGKPWRTAPC 
RAIRPPSQEF STLTATPAPS TPSIAPAEAA PAAAHEITVV DQGLLKRAVG AMALGNAMEW 
FDFGVYSYIA VTLGQVFFPS SSPSAQLLAT FGTFAAAFLV RPLGGMVFGP LGDRIGRQRV 
LAMTMIMMAV GTFAIGLIPS YDSIGLLAPA LLLVARLVQG FSTGGEYGGA ATFIAEFSTD 
KRRGFMGSFL EFGTLIGYVM GAGVVALLTA SLSHDALLSW GWRVPFLIAG PLGLIGLYIR 
MKLEETPAFK RQAEAREAQD KAVPKAHFRR QLARHWRALL LCVGLVLIFN VTDYMALSYL 
PSYLSSTLHF DEAHGLVLIL IVMVLMMPMT LATGRLSDAV GRKPVMLAGC IGLFALAIPA 
LLLIRTGETS LVFGGLLILG ALLSCFTGVM PSALPALFPT EIRYGALAIG FNVSVSLFGG 
TTPLAAAWLV DATGNLMMPA YYLMGAAVIG AISVMALPES ARQPLKGSPP AVASHREAHA 
LAREIKRREA AERDDGGYAS AAALRA