Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_I2755 |
Symbol | |
ID | 3848104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007651 |
Strand | + |
Start bp | 3166891 |
End bp | 3168282 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637842423 |
Product | DNA-damage-inducible protein F |
Protein accession | YP_443268 |
Protein GI | 83719590 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0789961 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCGCCT CCTCCACTTC CGCGCACGCG GGCGAAGACC CCGAGCCGCG ACCTGCCGGG AACCGGCATC GGCGCGTCCT CGGCCTCGCG CTGCCGATCA TCGCCGCGAA CCTCACGCAA CCGATTCTCG GCGCAGTCGA CACGGCCGTC GCCGGCCACC TGAACGGCCC GCAATATCTC GGCGGTGTCG CGCTCGGCGG CCTCTTCTTC AGTTTCGTGT ACTGGGGCTT CGGCTTCCTG CGGATGGGAA CGACCGGGCT CGTCGCGCAG GCATTCGGCG CGAATGACCT CGCGGGAATC CGCATCAACG TGCTGCGCGC GCTCCTGCTG GCGTTCGCGC TCGGCGCGGC GGTGCTCGCG CTGCAGACAC CGCTCGTCGG CATCGCGTTC GCCGCGCTCG GCGGTAGCGA TGCAGTGCGC GCAACCGCGC TCGAATACGC TCACGCACGA ATCTGGGCCG CGCCGTTCGC GCTCGCGAAC TATGTCGTGC TCGGCTATCT GCTCGGCATG CAGCGCGTGC GTCTAGCGCT CGTGATCCAG GTGTTCGTCA ACGTCGTCAA CATCGGCGCC GTGCTGCTCT ACGTGTACCG CTTCGACTGG GGTGTCGCCG GCATCGGCGC CGCGACCGCG ACCGCCGACA TCACGGGCTT CGCGCTCAGC TTGCTGCTGC TGCGCTGGCT GAACCCGCGC GGCCTCGCGA AGATCGGTCG CGCCGAACTC TTCGATCGCG CGGCGCTCGC GCGTCTCGTC GCCCTCAATC GCGATATCTT CATCCGCACG CTGTGCCTGC TGTCGGCGTT CGGCTGGTTC GCGCATCTCG GTGCGCGGCA AGGCGACGCA ACGCTCGCAG CCAACGCGCT GCTCCTCAAT TTCCAGACTT TCATGGCATA TGCGCTCGAC GGCTTCGCGC ATGCTGCCGA GGCGCTCGTC GGCGCCGCGG CCGGCGCGCG AAATCGCGAT GCATTCCGGC AAGCGCTGCG CACGACGTTC TTGTGGGCGG GAATCGGCGC GCTCGCGTTC GCGCTCGCCT ATTGGGGCGC CGGCAGTTGG ATCGTCGCGC AGCTCACCGA TCAATCGTCC GTGCGCGGCG TAGCAGAACG CTATCTTCCG TGGGCCGCGC TCTCGCCGGT CATTTCCGTC TGGGGCTTCA TGCTCGACGG CGTGTTCATC GGCGCGACGC ACACGCGCGC ACTGATGCGA GCGATGGCGA CATCGTTCGC GCTGTTCGTC GCCGCAACGC TCGCGCTGGT CGGCCCGTTC GGCAATCACG GGCTCTGGAT CGCATTGCTC GTGTTCATGG CCGCACGCGG CGCGACGCTT GCACGCCGGC TGCCGGCGCT CGAGCAAGCC ATCGCGCAAG ACGCGGCGGC GCCGGCGCGC GCCGCCGGCT GA
|
Protein sequence | MSASSTSAHA GEDPEPRPAG NRHRRVLGLA LPIIAANLTQ PILGAVDTAV AGHLNGPQYL GGVALGGLFF SFVYWGFGFL RMGTTGLVAQ AFGANDLAGI RINVLRALLL AFALGAAVLA LQTPLVGIAF AALGGSDAVR ATALEYAHAR IWAAPFALAN YVVLGYLLGM QRVRLALVIQ VFVNVVNIGA VLLYVYRFDW GVAGIGAATA TADITGFALS LLLLRWLNPR GLAKIGRAEL FDRAALARLV ALNRDIFIRT LCLLSAFGWF AHLGARQGDA TLAANALLLN FQTFMAYALD GFAHAAEALV GAAAGARNRD AFRQALRTTF LWAGIGALAF ALAYWGAGSW IVAQLTDQSS VRGVAERYLP WAALSPVISV WGFMLDGVFI GATHTRALMR AMATSFALFV AATLALVGPF GNHGLWIALL VFMAARGATL ARRLPALEQA IAQDAAAPAR AAG
|
| |