| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I2705 |
|---|
| Symbol | |
|---|
| ID | 3847362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | - |
|---|
| Start bp | 3097448 |
|---|
| End bp | 3100246 |
|---|
| Gene Length | 2799 bp |
|---|
| Protein Length | 932 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637842374 |
|---|
| Product | Rhs element Vgr protein |
|---|
| Protein accession | YP_443220 |
|---|
| Protein GI | 83718826 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTGG TCACGCAATT CACGTCGCTT TTCAGCGCTG CCAATTGTCT CTATTCCCTC
GATGGGGCGG GCGAAATCGC GTCGCTGCAG ATCGAGCGCT GGGTGGGGCG CGAGACGCTC
TCCGACAATT TCCAGTGGGA CGTCTACGCG CTCGCGACCG ATCCCGGTCT CGATCTCGAC
GCGATGCTCG GCCAGCGCGT GACGATTCGC ACCGCACTCG CGGACGGCAC GAGCGCGGTG
CGCAGCGGGC TCGTGGCGCA AGCCGAGTGC ATCGGCTACG ACGCCGGCCT CGCGCGGTAC
TACCTGCAGC TCGTGCCGTG GCTCGCCGCG CTCGCGCACG GGCGCGACGA GCGCACGTTC
GTGCGGCAGG GCATCGCGGA CGTGCTCGGC GCGGTGTTCG CGCCGTACGG CGCGATCGCC
CGCTGGCGCT TCACGGCGGA CGCGAACCAG CGTATCGCGG AGCTCGGCGC GCGCGACTAC
CGCGTGCAGT ACCGGACCCA CACGCATGTC GATTTCGTTC GGCACGTGCT CGCCGAAGCG
GGGCTCGGCT TTTGCTTCGT CGAAGACGCG GAAGCGCCCG CCGGCCACGC GATGCTGATC
TTCGACGACA GCGCGCAACT GCCCGAGGAC GACACGTCCG CGCGCATGGG CGGCGTGCCG
CAGCGGCTGA GCGGCACGGC GACGGAGCCG GACGACGCGA TCGTCGGCAT CGGGCAGTCG
CTGTCGCTCA CCGCGGATCG CGTCACGCTG ATCAGCAGCG ATTACCGCGG CAATCAGTCG
ACGACTGCGA CGGCGAGCCT CGGCAGCCCG GCCGGATCGC GCGAACTGTA CGACGACGTC
GGGCCGGAGG CGTTCGACAG CCTGCGCGAA GCCGACGACG CCGCGCGCCG GCACGCGGAC
GCGATCATTT CCGCGGCGCG CTTCTGGACG GGCTACAGCA CGTTGCGCAC CGCGCGCGTC
GGCCGCGCGC TGCGCATCGC GGGCGCGACG TGGCGCATGC CGCGCGGCGG CGCGCAGGCG
CCCGACGCGT TCGTGCTGAC GCGCGTCGAT CAAATCGGCG TCAACAATCT GCCCGCGACC
GTGATGGAAC GCATCGAGCG CGGCCTCGGC CCGCTGCCGC TCGTGAATCT CGATGCGCGC
GTGCTCGCGC AGGCGAAGGC GGGTGGCTAT GCGAACCGGT TCGATGCCGT GCCGCGCGAC
CAGGCATGGC GCCCGACGCT GGAAGACGGC ACCGGGCAGC GGCTGAACCC CGTGCCGACG
GCGCTCGGCG CGCAGACGGC GATCGTCGTC GGGCCGCAGG GCGAGTCGCG GCCGGGCTCG
ACGGGCCCGG TGCACACCGA TGCGCAGGGC AGACTGCGGC TGCGCTATCA CTGGCAGGCG
GACGGCGACA CGGGCACCTA TCCGACGCGC GCGATGCAGC GGCTCGCGAG CCAGGGCCAT
GGGCTGCAGC AGACACAGCG AATCGGCCAC GAAGTGCTCG TGCAGTTCGT CAACGGCCTC
GTGCACCGGC CGATCGTGCT CGGCGGGCTG TTCAACGGCC GAGGCGAGGG CGGCGAAGCG
CCGACGCCCG GCGGCGAAGC GGGGCAGCCG CTCGACGAAT CGATTTACAC GCAGGCCGCC
GATCATGTGG CGAGCGCGCA AGGCAATCTC GCGGGCGGCC ATAGCCCCGC ATGGCACGGC
GCGGGCGGCG GCGCGAAGCG CCACAATCAT GCGGGCGCGC TGTCCGGCTT CAAGAGCCAG
GGGTTCGACG GGCAGGGCTA CAACCAACTC GTCGCGGACG ATACCGATCG CATGGGCCGC
ATGCAGATGG CGACGACGCA CGCGGCGACC CAGCTCAACA TCGGCCACCT GCGCCATCAG
GCCGACAACT ATCTCGGCAG TTTTCGCGGG CAAGGCGTCG AGCTGCGCTC GGACGCGTAC
GGCGCGCTGC GCGGCGCGCG CGGCGTGCTG ATCTCCAGCT ATGCGCCGAC GGGGCCGTCG
CAGCCGGCGG GCGACGCGTC GGCGCTGCAG TCGCTGCTCG CGCAACAGGC GACGCTCGCG
AAGCTCCTCG ACAAATCGGC CGATACGCAC AAGACCTTGC CGTTCGCCGC GCAGCGCGGC
GCGGAGCAGG CCGGGCAGTC CTCGATGAAC GGCGACGCCG CGCCGCTCGA CGCGCTCAGG
AAGAGCTTCG CGACGACGGT CGGCGCAGAC GGCTACGCGC AGGCGTCTGC CGAGGCGTCG
AGCCGCTCGG CGGGCAATGC GCTGCCGCAT ACGGGCGACG CGGTGCTCGG GATCGAGGCG
AAGGGCGGCC ACGGTCTGCT GGCGGGCCAG TCACTGCAAT GGACGGTGGG CGAGACGCTG
ACCGTCGGCA GCGGCAGCGA CACGAATCTC GCGGTCAGTC GGACGCTGCG CATTCACAGC
GGACAGGGCA TCGGCTGGCT CGCCGGCGCG AACGGCGTGC AAGGCGTCGG CATGAGCGTG
ATCGCCGGCA AGGACGATCT GACGCTGCAG GCGCAGCATG ACGTGATGGC GCTGCGCGCG
CGCGACGATC TGAAGGTCGC GTCGATCGGC GCGGATGTCG AGATCGCGGC GAAGCAGACC
GTGCGCCTCG CGGTCAGCGG CGGCGCGCAT CTGACGATCG AAGGCGGCAA CGTCACGTTC
GGCTGCCCGG GCTCGCTCGT CGTCCACGCG GCGCAGCACA CGTTCGTCGG GCCGGATCAA
CTGGCCCCCG CGCTGCCGCA GTTTCCCGAG AAAGTGTGCG TCGAGTGCCT GAAGCACGCG
ATGCAATCGG GCAGCGCCCT CGCGGGCAAG GCGATCTGA
|
|---|
| Protein sequence | MSVVTQFTSL FSAANCLYSL DGAGEIASLQ IERWVGRETL SDNFQWDVYA LATDPGLDLD
AMLGQRVTIR TALADGTSAV RSGLVAQAEC IGYDAGLARY YLQLVPWLAA LAHGRDERTF
VRQGIADVLG AVFAPYGAIA RWRFTADANQ RIAELGARDY RVQYRTHTHV DFVRHVLAEA
GLGFCFVEDA EAPAGHAMLI FDDSAQLPED DTSARMGGVP QRLSGTATEP DDAIVGIGQS
LSLTADRVTL ISSDYRGNQS TTATASLGSP AGSRELYDDV GPEAFDSLRE ADDAARRHAD
AIISAARFWT GYSTLRTARV GRALRIAGAT WRMPRGGAQA PDAFVLTRVD QIGVNNLPAT
VMERIERGLG PLPLVNLDAR VLAQAKAGGY ANRFDAVPRD QAWRPTLEDG TGQRLNPVPT
ALGAQTAIVV GPQGESRPGS TGPVHTDAQG RLRLRYHWQA DGDTGTYPTR AMQRLASQGH
GLQQTQRIGH EVLVQFVNGL VHRPIVLGGL FNGRGEGGEA PTPGGEAGQP LDESIYTQAA
DHVASAQGNL AGGHSPAWHG AGGGAKRHNH AGALSGFKSQ GFDGQGYNQL VADDTDRMGR
MQMATTHAAT QLNIGHLRHQ ADNYLGSFRG QGVELRSDAY GALRGARGVL ISSYAPTGPS
QPAGDASALQ SLLAQQATLA KLLDKSADTH KTLPFAAQRG AEQAGQSSMN GDAAPLDALR
KSFATTVGAD GYAQASAEAS SRSAGNALPH TGDAVLGIEA KGGHGLLAGQ SLQWTVGETL
TVGSGSDTNL AVSRTLRIHS GQGIGWLAGA NGVQGVGMSV IAGKDDLTLQ AQHDVMALRA
RDDLKVASIG ADVEIAAKQT VRLAVSGGAH LTIEGGNVTF GCPGSLVVHA AQHTFVGPDQ
LAPALPQFPE KVCVECLKHA MQSGSALAGK AI
|
|---|
| |