| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I2625 |
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| Symbol | |
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| ID | 3848730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007651 |
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| Strand | + |
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| Start bp | 2987542 |
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| End bp | 2989347 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637842294 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family protein |
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| Protein accession | YP_443140 |
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| Protein GI | 83720224 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.407091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGTAA GAATGCGTTG CACCATTGTC GGTTTATTCG GCAATCCGCA AAAAAATATA
ATCGTACCCG ACTCATCTTT ATCCGAAAGG GAGAAAATCG TGCAGTCTCC GGCAACAAGA
GGGACGTTTG CACTCGCGGT TCTTGCAATC TCATTAATAA TGGCCGGATG TGCAAGCATG
GGCGATGTTG CACCGCAAGC AAAGCAGATC GATCCGGCGT CGCTCGATGC GGGCGCGGCG
ATCGCGGCGG CCGAGCGCGA CGCGGGCTGG CCCGCGGCCG ACTGGTGGCG CGCGTATCGC
GATCCGCAGC TCGACGCGTG GATCGCCGCG TCGCTCGCCG GCAACCCGTC GCTTGCCGCC
GCGCAGGCCC GCGTGCGCGA GGCGCAGTCG CTCGCGCGCG TCGCGCATGC CGAGGAACTG
CCGCAGTTGA ACGGCAACCT GTCACTGATG CGCCAGCACT GGCCGGACAA CGTCTACTAC
GGCCCAGGCC CGCTCGCGAA CGCCGACACC TGGAACAACA CGGGCACGTT GAGCCTGTCG
TACCACCTCG ACCTCTGGGG CAAGGACAAG AACAACGCGC AGCGCGCGCT CGACGCGGCG
CGCGCCCGCG CGGCCGACGC GCGCGCCGCG CAGCTCGAGC TCGAAGCGAA CGTGGTGCGC
GCGTACATCG ATTTCGCAAA GAACTACGCG CTCCTCGACA TCGCGCACGC GACCTACGAC
CGCCAGAACG AGCTCGCCGA ACTGGCGCGC AAGCGCCTGC GCGCGGGCAT CGGCACGCAG
CTCGAAGTGA GCCAGGCCGA GGCGCCGCTG CCCGATTATT CGCGGCAGAT CGATTCGTAC
GAAGAGGCGA TCCAGTTGGG CCGCCATCAG CTCGCCGCGC TCGCGGGCAA GGGGCCCGGC
GCGGGCGCGT CGCTCGGGCG GCCGAAGCTC GCGCTCGACG CGAACGCCGG CCTGCCGTCC
GCGCTGCCCG CGGAGTTGAT CGGCCGCCGG CCGGACGTCG TCGCCGCGCG CTGGACGGTC
GACGCGCAGG CGCGCGGCAT CGACGTCGCG AAGGCCGCGT TCTATCCGAA CGTCGACCTG
ATCGCGTCGC TCGGCGGCTT CGCGGTCAGC GCGCCGTTCG CGACGTTCCT GCGCGCGATG
AACGGCGGCT GGTCGGCGGG CCCCGCGCTC ACGCTGCCGA TCTTCGAGGG CGGCCGGCTG
CGCGCGCAAC TGGGCGTCGC CGCGGCGGGC TACGACCAAG CGGTCGAGCA CTACAACCAG
ACGATCGTCG GCGCGCTGAA GGACATCGCC GACAACGTCG TGCGCCTGCG CTCGCTCGAC
TCGCAACAGA AGGACGCGGC GCGCGCGGTC TCGCTCACGC GGCGATCGTA CGATCTTTCG
CACACGGGCT TCAGCCGCGG GCTCACCGAC TACGTGAACG TGCTCATCGC GCAGAGCCAG
TTGCTGACCG CGCAGGAGAA CCAGACGCGC GTCGAGGCCG CGCGTCTTGC CGCGCACGCG
TCGCTGATGG CCGCGCTCGG CGGCGGGCTC GAAACCGCGG GCGACGCACC GCATGACACG
CCGGCGGGCG ATGCGCGGCG CGCGGACGCT TCGGACGCTT CGGCGGCCTC GTCCGCTTCG
GCCGCCGCAT CCGTGTCGGG CGCGCCGGCA GGAAGCCGTG CCGCCGGCAT CGGCGCTGCG
GTCTCGGCCG GCGCCGACCG CGCAACCGAC AATACGCGCG CATCGGCCAC CACGCCCGCT
GCAGCCCCCG CGCACGCCGC TCGCGCGCGG GCGCCGGCGA GCGCCGCCGC GCCCGCCATC
CGCTAA
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| Protein sequence | MTVRMRCTIV GLFGNPQKNI IVPDSSLSER EKIVQSPATR GTFALAVLAI SLIMAGCASM
GDVAPQAKQI DPASLDAGAA IAAAERDAGW PAADWWRAYR DPQLDAWIAA SLAGNPSLAA
AQARVREAQS LARVAHAEEL PQLNGNLSLM RQHWPDNVYY GPGPLANADT WNNTGTLSLS
YHLDLWGKDK NNAQRALDAA RARAADARAA QLELEANVVR AYIDFAKNYA LLDIAHATYD
RQNELAELAR KRLRAGIGTQ LEVSQAEAPL PDYSRQIDSY EEAIQLGRHQ LAALAGKGPG
AGASLGRPKL ALDANAGLPS ALPAELIGRR PDVVAARWTV DAQARGIDVA KAAFYPNVDL
IASLGGFAVS APFATFLRAM NGGWSAGPAL TLPIFEGGRL RAQLGVAAAG YDQAVEHYNQ
TIVGALKDIA DNVVRLRSLD SQQKDAARAV SLTRRSYDLS HTGFSRGLTD YVNVLIAQSQ
LLTAQENQTR VEAARLAAHA SLMAALGGGL ETAGDAPHDT PAGDARRADA SDASAASSAS
AAASVSGAPA GSRAAGIGAA VSAGADRATD NTRASATTPA AAPAHAARAR APASAAAPAI
R
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