Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_I2567 |
Symbol | |
ID | 3849832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007651 |
Strand | - |
Start bp | 2931964 |
End bp | 2933472 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637842236 |
Product | RNA pseudouridylate synthase family protein |
Protein accession | YP_443084 |
Protein GI | 83720156 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00446007 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATCGCGC GCCGCCGCGC GGCCGCGAAA TCGAAGAATC CCGAGGCGGC GGAGAGCGCC GACGCACCTC CGGCGGCGGA AGCCGGGGCG GACGCCGGCG TCGCGAAAGC GCCGGCTCGC GCGCCGCGCA GCAAGGAGGG CGCGGCGAAG GCGCCGCGCA AGACAGCAGG CAAGCGGGAA GGCGCGGCGC GGCAAGGCGG CCAGGCGAAG CGCGGCGCGC CGGCGGCGGC CGCGCCGTCC GTCGAGGCTG GCCAGGACGA TGTGTTTGCC TATGTGATTT CGCCCGCATT CGATGCCGAC AACAACGCGT CGGGCGGCGG CGTGCGCGCG CCGATGCTGC GCCGGGGCCG CCAGAATCAG CCGAAGCGCG TGCTGTCGCC GGACGACGAC GCGCCGAAGT TGCACAAGGT GCTCGCGGAA GCCGGCATGG GCTCGCGCCG CGAGATGGAG GAGCTCATCA TCGCCGGCCG CGTGTCGGTG AACGGCGAGC CGGCGCATAT CGGCCAGCGG ATCATGCCGA CCGACCAGGT CCGGATCAAC GGCAAGCCGG TCAAGCGCAA GCTGCCGAAC AAGCCGCCGC GCGTGCTGCT TTACCACAAG CCGACGGGCG AGATCGTGAG CCACGCGGAC CCTGAGGGCC GCCCGTCGGT GTTTGACCGG CTGCCGCCGA TGAAGACCGC GAAATGGCTC GCGGTCGGCC GCCTCGACTT CAATACCGAG GGCCTGCTGA TGCTGACGAC GTCCGGCGAC CTCGCGAACC GCTTCATGCA TCCGCGTTAC AGCGTCGAGC GCGAGTATGC GGTGCGCGTT GTCGGCGAGC TGTCCGAGGC GTCGCGCCAG AAGCTGCTGC ACGGCGTCGA GCTCGACGAC GGCCCGGCTA ACTTCCTGCG CATTCGCGAC GGAGGCGGCG AAGGCACGAA CCACTGGTAT CACGTCGCGC TCGCCGAAGG GCGCAACCGC GAGGTGCGGC GGATGTTCGA GGCGGTCGGC CTGATGGTGA GCCGCCTGAT TCGCACGCGT CACGGCCCGA TTCCGCTGCC GCGCGGGTTG AAGCGCGGCC GCTGGGAGGA GCTCGACGAG GCGCAGGTGC GGCGCCTGAT GTCGACGGTC GGCCTGAAGG CGCCGGTCGA GGAGAAGGGC AAGCGCGGCG GCGCGGCCGA GCGCCGCCAG CCCGATCCGA TGCAGACGTC GATGGGCTTC ATCAATCGCG AACCGGTGCT GACGACTCAC GGCCAGCTCG ACCAGCCGCG GCGCGGCCGG CGCGGCCCGG CGGGCGGCGG CTTCGGCGCG GGCCTCGGCG GCGGCTATGC CGGCCTGCCG GGCTACGGCG GCGCGCCGCG CCAGGGCGGC CGCGACGTCG ACGGCAACCG TGCGCCCCAC GGAGGCGCGG GCGCGAACAA GCGCGGCGCG GGCAAGGGCG CGCGCAACCC GAACGGCAAT CGCGCCGAAG GCGGCGCGCG CGGCGGCCAG CGTTCGCCGC AGCAGCGCAA TCGTTCGCGC AGCCGCTGA
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Protein sequence | MIARRRAAAK SKNPEAAESA DAPPAAEAGA DAGVAKAPAR APRSKEGAAK APRKTAGKRE GAARQGGQAK RGAPAAAAPS VEAGQDDVFA YVISPAFDAD NNASGGGVRA PMLRRGRQNQ PKRVLSPDDD APKLHKVLAE AGMGSRREME ELIIAGRVSV NGEPAHIGQR IMPTDQVRIN GKPVKRKLPN KPPRVLLYHK PTGEIVSHAD PEGRPSVFDR LPPMKTAKWL AVGRLDFNTE GLLMLTTSGD LANRFMHPRY SVEREYAVRV VGELSEASRQ KLLHGVELDD GPANFLRIRD GGGEGTNHWY HVALAEGRNR EVRRMFEAVG LMVSRLIRTR HGPIPLPRGL KRGRWEELDE AQVRRLMSTV GLKAPVEEKG KRGGAAERRQ PDPMQTSMGF INREPVLTTH GQLDQPRRGR RGPAGGGFGA GLGGGYAGLP GYGGAPRQGG RDVDGNRAPH GGAGANKRGA GKGARNPNGN RAEGGARGGQ RSPQQRNRSR SR
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