Gene BTH_I2532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_I2532 
Symbol 
ID3849577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007651 
Strand+ 
Start bp2889346 
End bp2889972 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content69% 
IMG OID637842201 
Producthfq protein 
Protein accessionYP_443049 
Protein GI83719611 
COG category[R] General function prediction only 
COG ID[COG1923] Uncharacterized host factor I protein 
TIGRFAM ID[TIGR02383] RNA chaperone Hfq 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.597559 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAATC CTGCAGAATC CCATCCGCAA AACGACTTCA TCAATGCCGC GCGCAAGGAA 
CGCAAGCGCG TCGAAATTTA TCTCGTCAAC GGTATTCGCC TGACGGGATG CATCGAGTCG 
TTCGACCAGT ATCTGGTGAT GCTGCGCACG CCTGTCGGCC TGCAAGGCAT CTATAAACGC 
GCCATCTCGA CGATCCAGCT CGACACGGGC GGCTCACGTC CGGGCGGCCG CGGCCCGCGC 
ACGGGCGGCG GCGGTCGTCC CGGCGGACGC GAAGGCGGTG GTCACGGTCC GTACGGCTCG 
CACGGCGGCC CCCGCGAGTC GCGGGGTGAA GGCGGCGGCT ATGGCGCCCG CGAATCCCGT 
GGCGACGGCG GTTACGGCTC CCGCGAACCC CGTGGCGACG GCGGTTATGG CTCCCGCGAG 
CCCCGTGGCG ACGGCGGCGG TTACGGCTCC CGCGAATCCC GTGGCGACGG CGGATATGGC 
ACGCGTGAAC CGCGCGAGCC CCGCGAGTCT TACGGCGCGC CGCAAGAAGG CGCATCGACG 
CCGTCCGGCA CGCAAGATCG CAACAGCAAC GGCCCCGTGA TCGTCACGCG CCGCCGCCGC 
TCGCTCGGCC CGACCGACGG TCAATAA
 
Protein sequence
MANPAESHPQ NDFINAARKE RKRVEIYLVN GIRLTGCIES FDQYLVMLRT PVGLQGIYKR 
AISTIQLDTG GSRPGGRGPR TGGGGRPGGR EGGGHGPYGS HGGPRESRGE GGGYGARESR 
GDGGYGSREP RGDGGYGSRE PRGDGGGYGS RESRGDGGYG TREPREPRES YGAPQEGAST 
PSGTQDRNSN GPVIVTRRRR SLGPTDGQ