| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I2519 |
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| Symbol | rnr |
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| ID | 3849010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007651 |
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| Strand | - |
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| Start bp | 2872140 |
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| End bp | 2874827 |
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| Gene Length | 2688 bp |
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| Protein Length | 895 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637842188 |
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| Product | ribonuclease R |
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| Protein accession | YP_443038 |
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| Protein GI | 83721027 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000714577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGTCTAC CAATTTCGCC ACCTGGGCAG GTGTGTGCTG CAAAGACCGC TATTATAGAC
GGCCGATTGA TCCTGTCAAT ACTTTTTCAT CGGCTGCGCG CACCGCCGCG CGTGCGGCGC
AATACGCGGT GCGCGGTCCG TTCGCCGCAG CGGCGGGTGT TAGAATGGGG CGGCATGAGC
GGCGCGCCCG TTCGGCTCCG CTTGCCGCGG TCGCGCAAGC CAAACGCAAC GAGAAAAATC
ATCGACAAGC CCTTGAGCAA GTATCCGTAT CCCATCCCGA GCCGCGAAGA GATTCTCGGC
GTGCTGCGCA CGAGCGACGC GCCGCTTGCC GCGAACGACA TCGCTGAAGC ACTGTCGATC
AAGCGTCAGG AGCGCGAAGG ATTTTTCCGC CGCGTCGCCG CGATGGAGCG CGACGGCCAG
ATCCGTCTCG ACAAGCGCGG CCATTATCAG CTCACGCATC CGTCCAACTT CGTCGCCGGT
CGCGTGCAAG GCCATCGCGA TGGCTACGGC TTCGTGATCC GCGACGACGG CCAGGACGAT
CTGTTCCTGC CGAATGCCGA GATGCAGAAG GTCATGCACA ACGATCGGGT GCTCGCGCGG
ATCGTCGGCT ATGACCGGCG CGGCCGGCCG GAAGGGCACG TCGTCGAGGT GACCGAGCGC
GCGAACAAGC GGGTGATCGG GCGTCTGCTG AACGAGAACG GCGCGCTCAT CGTCGCGCCC
GAGGACAAGC GGATCAGCCA CGACATCCTC GTCACGCAAA ACGTGAAGAA GGCGAAGGTC
GGCCAGGTGG TCGTCGTCGA GCTCACTGAT TTCCCGAGCC GTCATTCGCA GCCGCTCGGC
CGCGTCGTCG AGGTGCTCGG CGACATCGAC GATCCCGGCA TGGAGATCGA GATCGCGGTG
CGCAAGTACG GCGTGCCGCA CGAATTCGGT CCGAAGGCGC TCGGCGAGGC CGCCGCGTTG
CCGGACAAGG TGCGGCCCGC GGATTTGCGC TATCGCGTCG ACCTGCGCGA CGTGCCGCTC
GTCACGATCG ACGGCGAGGA CGCGCGCGAC TTCGACGACG CCGTGTACTG CGAGCCCGTC
GCGGTCGGCC GCGGCGAGGG CTTTCGGCTC ATCGTCGCGA TTGCGGACGT GTCGCACTAC
GTGCAGCCCG GCAGCCCGCT CGACGTCGAC GCGGTCGAGC GCAGCACGTC GGTTTATTTC
CCGCGCCGCG TGATTCCGAT GCTGCCGGAG AAGCTGTCGA ACGGGCTTTG CTCGCTCAAT
CCGCAGGTCG ACCGCTGCGT GCTCGCGTGC GACATGATCA TCAACGCGCG CGGCGACATC
AAGGCATACC AGTTCTATCC GGCCGTGATC CATTCGGCCG CCCGGCTCAC GTATACCGAA
GTGGCCGCGG TGCTCGCGAA CACGAAGGGG CCGGAGGCCG CGCGCCGCGC CGAGCTGATG
CCTCACCTGC AGAACCTGTA CGGCGTCTAC AAGGCGCTCT TCACCGCCCG GCAGAAGCGT
GGCGCGATCG ATTTCGACAC GACCGAGACG TACATCGTCT GCAACACGCA AGGCAAGATC
GAGCAGATCC TGCCGCGCCA GCGAAACGAC GCGCATCGGC TGATCGAGGA GTGCATGCTC
GCCGCGAACG TCTGCGCGGC CGATTTCCTC AAGCGCAACA AGCACCCGGG CCTCTACCGC
GTGCATGCGG GCCCGACTCC CGAGAAGCTC GAGAACCTGC GTGCGTTCCT GCGCGACATG
GGGCTCACGC TGGGCGGCGG CGACACGCCG CACGCGAGCG ATTACGCGGC GCTGATGGCG
CACATCCGCG ACCGGCCCGA TGCGCAGATG CTGCAGCCGA TGCTGCTGCG CTCGATGCAG
CAGGCGGTCT ACAGCCCCGA CAACATCGGA CACTTCGGTC TCGCGTACGA CGCGTACGCG
CACTTCACGA GCCCGATCCG CCGCTATCCC GATCTGCTCA CGCATCGCGC GATCTATGCG
ATCCTGTCCG GCAAGAAGTA CACGCCGAAG TCGCCGGAAG GCGTCGAGCT CAATACCGCG
CTGTCGCCGC GCGCGCGCGC GATGCAGCGC GAGGAAGACG AGACGCGCGG CCGCGCGCGG
TCGAACGCGG CGATTTGGGA GGAGCTCGGG CTTCACTGCT CGGCGAACGA GCGGCGCGCG
GACGAAGCGT CGCGCGACGT CGAAGCCTGG CTCAAGTGCT ATTTCATGCG CGACAAGCTC
GGCGAGGAAT ACGGCGGGAT GGTGAACGGC GTCACATCGT TCGGCATCTT CGTGCAGCTC
GATGCGCTTT TCATCGAAGG CCTCGTGCAC GTGACCGAGC TCGGCGCCGA CTACTTCCAG
TACGACGAAG TCAAGAACGA ACTGCGCGGC GAGCGCACGG GCATTCGCTA CCGGCTGTCC
GACCGCGTGC GCGTGCAGGT GAGCCGCGTC GATCTCGACG CGCGCAAGAT CGATTTCCGC
CTCGTGCGCG AGACGCCCGT GAAGGCGCCG CGTCCGGCGG CGCCGGCGGG CGCCGGCGAA
TCGGGCGGAC CGCGCGTGCG CGCGCTGCCG TCCGCCGAAG GGGCCGCGCG GCGCAAGAAG
GCCGCGAGCG CGCCGAGCGC GGCGGTGAAG GAGGCCCGGG CCGCCCGCAA GAAGGGCGCC
GCGTCGAAGC CGGCCGCGAA GAAGGCGCGT TCGCGCAAGA AGTACTGA
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| Protein sequence | MRLPISPPGQ VCAAKTAIID GRLILSILFH RLRAPPRVRR NTRCAVRSPQ RRVLEWGGMS
GAPVRLRLPR SRKPNATRKI IDKPLSKYPY PIPSREEILG VLRTSDAPLA ANDIAEALSI
KRQEREGFFR RVAAMERDGQ IRLDKRGHYQ LTHPSNFVAG RVQGHRDGYG FVIRDDGQDD
LFLPNAEMQK VMHNDRVLAR IVGYDRRGRP EGHVVEVTER ANKRVIGRLL NENGALIVAP
EDKRISHDIL VTQNVKKAKV GQVVVVELTD FPSRHSQPLG RVVEVLGDID DPGMEIEIAV
RKYGVPHEFG PKALGEAAAL PDKVRPADLR YRVDLRDVPL VTIDGEDARD FDDAVYCEPV
AVGRGEGFRL IVAIADVSHY VQPGSPLDVD AVERSTSVYF PRRVIPMLPE KLSNGLCSLN
PQVDRCVLAC DMIINARGDI KAYQFYPAVI HSAARLTYTE VAAVLANTKG PEAARRAELM
PHLQNLYGVY KALFTARQKR GAIDFDTTET YIVCNTQGKI EQILPRQRND AHRLIEECML
AANVCAADFL KRNKHPGLYR VHAGPTPEKL ENLRAFLRDM GLTLGGGDTP HASDYAALMA
HIRDRPDAQM LQPMLLRSMQ QAVYSPDNIG HFGLAYDAYA HFTSPIRRYP DLLTHRAIYA
ILSGKKYTPK SPEGVELNTA LSPRARAMQR EEDETRGRAR SNAAIWEELG LHCSANERRA
DEASRDVEAW LKCYFMRDKL GEEYGGMVNG VTSFGIFVQL DALFIEGLVH VTELGADYFQ
YDEVKNELRG ERTGIRYRLS DRVRVQVSRV DLDARKIDFR LVRETPVKAP RPAAPAGAGE
SGGPRVRALP SAEGAARRKK AASAPSAAVK EARAARKKGA ASKPAAKKAR SRKKY
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