| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I2460 |
|---|
| Symbol | |
|---|
| ID | 3848999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | - |
|---|
| Start bp | 2814986 |
|---|
| End bp | 2816023 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 637842129 |
|---|
| Product | CpaB family Flp pilus assembly protein |
|---|
| Protein accession | YP_442981 |
|---|
| Protein GI | 83721444 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3745] Flp pilus assembly protein CpaB |
|---|
| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0968707 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCATT TTCTCAAGCT CGCCGGTCTG ATGCTCGTCG CGGTGGTCGG CGCGTTCCTG
TTTCGCGCGC TGTACGTCGC GGCGTCGCAG CCGCGCCCGG CCGCGCCGCC GCAGCAGGTG
CGCGTGCGCG TCGCGGCCGC CGATCTGCCG GCGGGCCTGC TGCTGCGCGA CGTCGATCTC
GGCTGGAAGA CGATGGCGCG CGGCGACGTG CCAGCCGGCG CATTGATCGA AGGCGATGCG
CGCGGCGACG GCCGGACTGC CGGCGCGGCG GTCGATGCGA GTGCAGCCGC AGCCGGCGAT
CTGAAGGGCG ACTTGCTGCG CCATCCGGTG CGCGAGGGCA TGCCGCTCGG CCCGGCCGAC
GTGATCTTGC CGAGCGCGCC CGGCTTTCTC GCGGCCGCGC TCAAGCCCGG CATGCGTGCG
ATCTCGGTCG CGATCGACGA CGTATCCGGC AATGCCGGCC TGATTGAACC GGGCGATTAC
GTTGACGTGC TGCTCACGCA GCAGCTCGCC GCGCCGGGCG GCGCGCCGGC CGACCCGGAG
CGCGCGGTCG AATCGGAGAC GATCGCCGCG CGCGTGCGCG TGCTCGCGGT CGGCTCCGCG
TTCCAGCGGC CGAAGGACGA CGCCGCGCAG CCGAACACGC GCGCGCGCAC TGTGACGTTC
GAAGTGAGTT CGCACGACGC GCAGGTGATC ACGGTCGGCG CGCATCTGGG CGCGCTGTCG
CTCGCGCTGC GCAGCTTCGC GACGAGCGAT CGCGGCGCGG TCGGCTTGGC GTCGGCGGAG
CCGCCCGCGC CGCCCGTGTG GGCGGGCGAC GTGTCGCGCG CGCTGCGCGC CGAGGCGCCG
GCCGCGACGT CGGCGCAGCC GCGTCGCGTC GGCGCGCGCG CGGGAGGCGA GCGGCACGTG
ATTGTCTATC GCGGCTCGAA ACAGGATGAC GGGGCGGGCG CCGGCGCGCC GCTGCCGGGC
GGCGTGCCGC CGATTCCGAC GCTGCCGCCG CTGCCGGGAA CGGCGGCGGC GCCCGCCGGC
GCGCGGCCGG CGGCGTGA
|
|---|
| Protein sequence | MSHFLKLAGL MLVAVVGAFL FRALYVAASQ PRPAAPPQQV RVRVAAADLP AGLLLRDVDL
GWKTMARGDV PAGALIEGDA RGDGRTAGAA VDASAAAAGD LKGDLLRHPV REGMPLGPAD
VILPSAPGFL AAALKPGMRA ISVAIDDVSG NAGLIEPGDY VDVLLTQQLA APGGAPADPE
RAVESETIAA RVRVLAVGSA FQRPKDDAAQ PNTRARTVTF EVSSHDAQVI TVGAHLGALS
LALRSFATSD RGAVGLASAE PPAPPVWAGD VSRALRAEAP AATSAQPRRV GARAGGERHV
IVYRGSKQDD GAGAGAPLPG GVPPIPTLPP LPGTAAAPAG ARPAA
|
|---|
| |