| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I2444 |
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| Symbol | |
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| ID | 3849708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007651 |
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| Strand | - |
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| Start bp | 2796140 |
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| End bp | 2799271 |
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| Gene Length | 3132 bp |
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| Protein Length | 1043 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637842113 |
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| Product | multidrug efflux protein |
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| Protein accession | YP_442965 |
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| Protein GI | 83720423 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.678369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCGTT TCTTCATCGA TCGCCCGGTG TTCGCATGGG TGATCTCCTT ATTCATCATG
CTGGGCGGCA TCTTCGCGAT CCGCGCGCTG CCCGTCGCGC AGTATCCGGA CATCGCGCCG
CCCGTCGTCA GCCTCTACGC GACGTATCCG GGCGCGTCCG CGCAGGTCGT CGAGGAATCG
GTCACGGCCG TGATCGAGCG CGAGATGAAC GGCGTGCCCG GCCTGCTGTA CACGTCGGCG
ACGAGCAGCG CCGGCCAGGC GTCGCTGTCG CTCACGTTCA AGCAGGGCGT GAGCGCCGAT
CTCGCGGCCG TCGACGTGCA GAACCGCCTG AAGACCGTCG AGGCGCGGCT GCCCGAGCCC
GTGCGGCGCG ACGGCATCTC GATCGAGAAG GCGGCCGACA ACGCGCAGAT CATCGTGTCG
CTCACGTCGG AGGACGGCCG GCTGTCGGGC GTGGAACTCG GCGAGTACGC TTCGGCGAAC
GTGCTGCAGG CGCTGCGGCG CGTCGAGGGC GTCGGCAAGG TGCAGTTCTG GGGTGCCGAG
TACGCGATGC GGATCTGGCC GGACCCCGTC AAGATGGCGG CGCTCGGCCT GACGGCGTCC
GACATCGCGT CGGCCGTGCG CGCGCACAAC GCGCGCGTGA CGATCGGCGA CGTCGGCCGC
AGCGCGGTGC CCGACAGCGC GCCGATCGCG GCGACCGTGC TCGCCGACGC GCCGCTCACG
ACGCCCGACG CGTTCGGCGC GATCGCGCTG CGCGCGCGCG CCGACGGCTC GACGCTCTAC
CTGCGCGACG TCGCGAGAAT CGAGTTCGGC GGCAACGACT ACAACTACCC GTCGTTCGTG
AACGGCAAGA CGGCGACGGG CATGGGCATC AAGCTCGCGC CCGGCTCCAA CGCGGTCGCC
ACCGAAAAGC GCGTGCGCGC GACGATGGAC GAGCTCGCGA AGTTCTTCCC GCCGGGCGTC
AAGTACCAGA TTCCGTACGA GACGGCGTCG TTCGTGCGCG TGTCGATGAG CAAGGTCGTG
ACGACGCTCG TCGAGGCGGG CGTGCTCGTG TTCGCGGTGA TGTTCCTCTT CATGCAGAAC
TTCCGCGCGA CGCTGATTCC GACGCTCGTC GTGCCCGTCG CGCTGCTCGG CACGTTCGGC
GCGATGCTCG CCGCGGGCTT CTCGATCAAC GTGCTGACGA TGTTCGGGAT GGTGCTCGCG
ATCGGCATCC TCGTCGACGA CGCGATCGTC GTCGTCGAAA ACGTCGAGCG GCTGATGGTC
GAGGAGAAGC TGCCGCCGTA CGAGGCCACC GTGAAGGCGA TGAAGCAGAT CAGCGGCGCG
ATCGTCGGGA TCACCGTCGT GCTCACGTCG GTGTTCGTGC CGATGGCGTT CTTCGGCGGC
GCGGTCGGCA ACATCTACCG GCAGTTCGCG TTCGCGCTCG CGGTGTCGAT CGGCTTCTCG
GCGTTCCTCG CGCTGTCGCT CACGCCGGCG CTCTGCGCGA CGCTGCTCAA GCCCGTCGCC
GACGACCATC ACGAGAAGGA CGGCTTCTTC GGCTGGTTCA ACCGCTTCGT CGCGCGCTCG
ACGCACCGCT ACACGCAGCG CGTCGGGCGG GTGCTCAAGC GTCCGCTGCG CTGGCTCGTC
GTCTACGGCG CGCTGACGGC CGCCGCCGCG CTGCTGATCA CGAAGCTGCC GGCCGCGTTC
CTGCCCGACG AGGATCAGGG CAACTTCATG GTGATGGTGA TCCGCCCGCA GGGCACGCCG
CTCGCCGAGA CGATGCAGAG CGTGCGGCGC GTCGAGGAAT ACGTGCGCAC GCATTCGCCG
AGCGCGTACA CGTTCGCGCT CGGCGGCTAC AACCTGTACG GCGAGGGGCC GAACGGCGGG
ATGATCTTCG TCACGATGAA GGACTGGAAG GAGCGCAAGC GGGCGCAGGA CCAGGTGCAG
GCGATCATCG CGGGGATCAA CGCGCATTTC GCGGGCACGC CGAATACGAT GGTGTTCGCG
ATCAATATGC CGGCGCTGCC GGACCTCGGC CTGACGGGCG GCTTCGACTT CCGGCTGCAG
GACCGCGGCG GGCTCGGCTA CGGCGCGTTC GTCGCCGCGC GCGAGAAGCT GCTCGCCGAC
GGGCGCAAGG ACCCCGTCCT CACCGATCTG ATGTTCGCCG GCACGCAGGA CGCGCCGCAG
CTCAAGCTCG ACATCGATCG CGCGAAGGCG TCGGCGCTCG GCGTATCGAT GGAGGAAATC
AACGCGACGC TCGCGGTGAT GTTCGGCTCG GACTACATCG GCGATTTCAT GCACGGCTCG
CAGGTGCGCC GCGTGATCGT GCAGGCGGAC GGGCAGCACC GGCTCGATCC GGGCGACGTG
ACGAAGCTGC GCGTGCGCAA CGCGAAGGGC GAGATGGTGC CGCTCGCCGC GTTCGCGACG
CTGCACTGGA CGATGGGCCC GCCGCAGTTG ACACGCTACA ACGGCTTCCC GTCGTTCACG
ATCAACGGCG CCGCGTCGGC CGGGCACAGT AGCGGCGAGG CGATGGCCGC GATCGAGCGG
ATCGCGTCGG CGCTGCCCGC GGGCATCGGC TACGCGTGGT CGGGCCAATC GTACGAGGAG
CGGCTGTCGG GCGCGCAGGC GCCGATGCTG TTCGCGCTGT CGGTGCTCGT CGTGTTCCTC
GCGCTCGCGG CGCTGTACGA GAGCTGGTCG ATCCCGTTCG CGGTGATGCT CGTCGTGCCG
CTCGGCGTGA TCGGCGCGGT CGCGGGCGTC ACGCTGCGCG GGATGCCGAA CGACATCTAT
TTCAAGGTGG GGCTGATCGC GACGATCGGG TTGTCCGCGA AGAACGCGAT CCTGATCGTC
GAGGTCGCGA AGGACCTGGT CGCGCAGGGC ATGTCGCTCG CCGACGCGGC GCTCGAGGCG
GCGCGCCTGC GGCTGCGGCC GATCGTGATG ACCTCGCTCG CGTTCGGCGT CGGCGTGCTG
CCGCTCGCGT TCGCGACGGG CGCCGCGTCC GGCGCGCAGA TCGCGATCGG CACCGGCGTG
CTCGGCGGCG TGATCAGCGC GACGCTGTTC GCGATCTTCC TCGTCCCGCT CTTTTTCGTA
TGCGTCGGCC GCGTGGTCGA CATCGTTCCG CGTCGCCGCG GCGGCGCGCG CGCGGCACTG
GAGATCAAGT GA
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| Protein sequence | MARFFIDRPV FAWVISLFIM LGGIFAIRAL PVAQYPDIAP PVVSLYATYP GASAQVVEES
VTAVIEREMN GVPGLLYTSA TSSAGQASLS LTFKQGVSAD LAAVDVQNRL KTVEARLPEP
VRRDGISIEK AADNAQIIVS LTSEDGRLSG VELGEYASAN VLQALRRVEG VGKVQFWGAE
YAMRIWPDPV KMAALGLTAS DIASAVRAHN ARVTIGDVGR SAVPDSAPIA ATVLADAPLT
TPDAFGAIAL RARADGSTLY LRDVARIEFG GNDYNYPSFV NGKTATGMGI KLAPGSNAVA
TEKRVRATMD ELAKFFPPGV KYQIPYETAS FVRVSMSKVV TTLVEAGVLV FAVMFLFMQN
FRATLIPTLV VPVALLGTFG AMLAAGFSIN VLTMFGMVLA IGILVDDAIV VVENVERLMV
EEKLPPYEAT VKAMKQISGA IVGITVVLTS VFVPMAFFGG AVGNIYRQFA FALAVSIGFS
AFLALSLTPA LCATLLKPVA DDHHEKDGFF GWFNRFVARS THRYTQRVGR VLKRPLRWLV
VYGALTAAAA LLITKLPAAF LPDEDQGNFM VMVIRPQGTP LAETMQSVRR VEEYVRTHSP
SAYTFALGGY NLYGEGPNGG MIFVTMKDWK ERKRAQDQVQ AIIAGINAHF AGTPNTMVFA
INMPALPDLG LTGGFDFRLQ DRGGLGYGAF VAAREKLLAD GRKDPVLTDL MFAGTQDAPQ
LKLDIDRAKA SALGVSMEEI NATLAVMFGS DYIGDFMHGS QVRRVIVQAD GQHRLDPGDV
TKLRVRNAKG EMVPLAAFAT LHWTMGPPQL TRYNGFPSFT INGAASAGHS SGEAMAAIER
IASALPAGIG YAWSGQSYEE RLSGAQAPML FALSVLVVFL ALAALYESWS IPFAVMLVVP
LGVIGAVAGV TLRGMPNDIY FKVGLIATIG LSAKNAILIV EVAKDLVAQG MSLADAALEA
ARLRLRPIVM TSLAFGVGVL PLAFATGAAS GAQIAIGTGV LGGVISATLF AIFLVPLFFV
CVGRVVDIVP RRRGGARAAL EIK
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