| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I2443 |
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| Symbol | |
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| ID | 3849497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007651 |
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| Strand | - |
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| Start bp | 2794578 |
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| End bp | 2796212 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637842112 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_442964 |
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| Protein GI | 83720933 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.167735 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCGGC CGCGTGGTCG ACATCGTTCC GCGTCGCCGC GGCGGCGCGC GCGCGGCACT
GGAGATCAAG TGAAAACGAT GATGAAACCC CTGGCCCGTC AGGGCGGGCC GCACGGTTCG
CGGCGGCCGG GCGGGCTGCG GGCATGGCCG GCCGCCCTCG CGGCCGCGCT CGTCACGGGC
TGCACGCTCG CGCCGCGCTA CGAGCGTCCG GCCGCGCCCG TGCCGGCGAA TTATCTGCCC
GCGGCGGCGG GCGCGCCGCG CGCCGCGAGC CCGGCGGCAG CCGGCAGCGG CGCGCGCGAC
GCGCAGCCAG CGTCCGACGC GCGCGGCGGC GGCAATGTGC AGGAGATGCA CGATGTGCGC
CTCGACGACT GGCGCGCGTA CTTCACCGAT CCGGCGCTGC GCGCGCTGAT CGACGCGGCG
CTCGCGAACA ATCGCGATCT GCGGATCGCG ACGCTGCGCA TCGAGGAGGC ACGCGGCCTT
TACGGCGTCG CGCGCGCGGA CCGGCTGCCG TCGATCGACG GCAGCCTCGG CTACGAGCGC
ACGCGGCTCT ACGACCCGGT GCTGCGCGAG AGCGCGACGA GCTCGCTGTA TCGCGCGAGC
GTCGGCTTGA GCGCGTTCGA GATCGACCTG TTCGGCCGCG TGAAGAGCCT GTCGGACGCG
GCGCTCGCCG AGTACTTCGC GACCGCCGAG GCGCAGCGCG CGGCGCGCGT CAGCCTGATC
GCCGAAGTCG CGTCCGCCTA TGTGCGCGAG CGCGCGCTCG TCGACCAACT GAAGCTCGCC
GAACGCACGC TCGCCGCGCG CGACGCGACT TACGCGCTCA CGCAGCGCCG CTACGCGGCG
GGCACGAGCA CGGCGATCGA GCTGCGCACG GCCGAGATGC TCGTCGCGTC CGCGCGCGCA
TCGAAGGCGG CGCTCGAGCG CGAGCACACG CAGGCGGCGA GCGCGCTGAA GCTGCTCGCG
GGCGACTTCA CGGCGGCCCT GCCCGCCGAT GCGCCCGCGC TCGACGAACT CGCGGTCGCG
CGGGTGTCGC CGGGGCTGTC GTCGGACCTG CTCGAGCAGC GGCCTGACAT CCGGCAGGCC
GAGCAGCGGC TCGTCGCGGC GAACGCGAAC ATCGGCGCGG CGCGCGCGGC GTTCTTCCCG
CGCATCGCGC TCACGACCGA CATCGGCTCG GTGAGCGACG CGTTCTCGGG GCTCTTCTCG
GCAGGCTCGA GCGTGTGGAC GTTCGCGCCG CGGCTCACGC TGCCGATCTT CGCGGGCGGA
CGCAATCGCG CGAATCTCGA TGTCGCCGAC GCGCGCAAGC ATATCGCGGT CGCCGAATAC
GAAAAGACGA TCCAGACGGC GTTCCGCGAA GTGGCCGACG CGCTCGCCGC GCGCGATCAG
ATCGATGCGC AGCTCGCCGC GCAGCAGGCG GTCTACGGCG CGGACGCCGA GCGGCTGCGG
CTCGCGGAGC GGCGCTACGG CAGCGGCGTC GCAAGCTATC TCGAATTGCT CGACGCGCAG
CGCAGCACGT TCGAGTCCGG GCAGGAACTG ATTCGCCTGA AGCAGTTGCG GCTCACGAAC
GCCATCACGC TGTATCGCGC GCTCGGCGGC GGCTGGTCGC GCGCCGCGTG CGGCGGCGAA
GACGCGTGTG CGTGA
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| Protein sequence | MRRPRGRHRS ASPRRRARGT GDQVKTMMKP LARQGGPHGS RRPGGLRAWP AALAAALVTG
CTLAPRYERP AAPVPANYLP AAAGAPRAAS PAAAGSGARD AQPASDARGG GNVQEMHDVR
LDDWRAYFTD PALRALIDAA LANNRDLRIA TLRIEEARGL YGVARADRLP SIDGSLGYER
TRLYDPVLRE SATSSLYRAS VGLSAFEIDL FGRVKSLSDA ALAEYFATAE AQRAARVSLI
AEVASAYVRE RALVDQLKLA ERTLAARDAT YALTQRRYAA GTSTAIELRT AEMLVASARA
SKAALEREHT QAASALKLLA GDFTAALPAD APALDELAVA RVSPGLSSDL LEQRPDIRQA
EQRLVAANAN IGAARAAFFP RIALTTDIGS VSDAFSGLFS AGSSVWTFAP RLTLPIFAGG
RNRANLDVAD ARKHIAVAEY EKTIQTAFRE VADALAARDQ IDAQLAAQQA VYGADAERLR
LAERRYGSGV ASYLELLDAQ RSTFESGQEL IRLKQLRLTN AITLYRALGG GWSRAACGGE
DACA
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