Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_I2427 |
Symbol | |
ID | 3848631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007651 |
Strand | - |
Start bp | 2777917 |
End bp | 2778630 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637842096 |
Product | extracytoplasmic-function sigma-70 factor |
Protein accession | YP_442948 |
Protein GI | 83720554 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.773332 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGAAG TGCTCGCTCG GCCGGCGCCG GCAAAACCGT TACCGATCCT CGCTTCGGAC GCGGCGTTCG CGCCCGCCTC GGCGCCCGGT TTGCGCGCAC CATCGCGCGC CGCGGCGCGC ACGCCGGGCG CGCGCGAGCA CGGCGCGCTC GTCGACGTGC TGGTCGCGAA CCGGCCGATG CTCGTCAAGC TCGCGCGCGG CTTCGTCGGC TGCGCGAGCC GCGCGGAGGA CGTCGTGCAC GACGTGTTCG TGAAGCTCGT CGATTTCCCG AACCAGGATG CGATCCGGCA GCCCGTCGCG TACGTGACGC GGATGGTTCG CAACGCGTCG ATCGACGCGT GCCGCCGCCA GACGCTCGAG AACACCTACC ACGCGGACGA GGACGACGGC CTCGACGTGC CTTCGTCCGA GCTGTCGCCG GAGGCGGCGC TCGTCGTGCG CGACACGTTG CGTCACGTGT ACGACGCGCT CGCGCAACTG CCCGCGCGCA GCCGCGCCGC ATTCGAGATG GTCCGGCTGC GCGAGGAGAC GCTGCAGAGC GCCGCACGCG CGCTGAACGT GTCGCAGACG CTCGTGCATT TCATGGTCCG CGACGCCGAG CGGCACTGCG TCGCGTGCGT CGACGCGTCC GAGCGCGGGC TCGCGTGCCC GGCGTTTTGC GGCGCGCGCG CGCGGCCGGT AAAAAAATGC GTGCGCGATT CGTCTATCGA GTAA
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Protein sequence | MAEVLARPAP AKPLPILASD AAFAPASAPG LRAPSRAAAR TPGAREHGAL VDVLVANRPM LVKLARGFVG CASRAEDVVH DVFVKLVDFP NQDAIRQPVA YVTRMVRNAS IDACRRQTLE NTYHADEDDG LDVPSSELSP EAALVVRDTL RHVYDALAQL PARSRAAFEM VRLREETLQS AARALNVSQT LVHFMVRDAE RHCVACVDAS ERGLACPAFC GARARPVKKC VRDSSIE
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