Gene BTH_I2378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_I2378 
Symbol 
ID3848386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007651 
Strand
Start bp2704945 
End bp2706096 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content68% 
IMG OID637842047 
ProductABC transporter, periplasmic glycine/betaine-binding protein, putative 
Protein accessionYP_442899 
Protein GI83720523 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAGTC CAAAGCGATT GGATGCGATT ATTCGCGACT ATTCGGCCCC GCGCGTGAAC 
GCGCCCTTGT TTGCCAAAGC GCGCCCGCTC AAGTACCTTG ACCCCCTGCC GCCTGCGATC
GGCCCCGCTT CGCCCCCGGC CGAGTGCCGC CTCCCGGGCG GGCGGCGGCC ATTGCATCCG
CTCATTTGCT GCCCGACAGG AGTGCCTGCC CCGATGAAAG TTCCCCGCTT CAGCCGTTCC
CTGCGCGCGG CTGCCGCCGC CCTCGCCGTT TCCGTCTGCG CCACCGCGCC CGGCGCGCAC
GCCGCCGGCG CGATCACCGT CGCGTCGAAG ATCGACACCG AGGGCAATCT GCTCGGCAAC
GTGATCGCGC AGGTGCTGAA GGCGCACGGC ATCGCCGTCG TCGACAAGAT CGGGCTCGGC
GCGACGCCGA TCGTCAGAAA GGCGCTGACG ACGGGCGAAA TCGACATCTA TCCGGAATAC
ACGGGCAACG CCGCGTTCTT CTTCAACAAG GCCGACGATC CCGCGTGGAA GAACGCCGCG
CAAGGCTACG CGCTCGCCAG GCAGCTCGAT TACGCGGCGA ACCGGATCGT CTGGCTCGCG
CCCGCGCCCG CGAACAACAC GTGGGGCGTC GCGGTGCTGA GCTCGGTCGC GCAAGCGCAG
CATCTGAAGA CGTTCAGCGA CTTCGGCAGA TGGGTCGGCG CGGGGGGCAA GGTGAAGCTC
GCCGCGTCGG CCGAGTTCGT CAACAGCGCG TCGGCGCTGC CGTCGTTCGA GAAGGTGTAC
GGCTTCAAGC TGAAGCAGGA GCAGATGCTC GTGCTGTCGG GCGGCGACAC CGCGGCGACG
ATCAAGGCCG CCGCGCAGCA GACGGACGGC GTGAACGCCG CGATGGTCTA CGGCACCGAC
GGCGGCATCG CGGCCGCCGG GCTCACGGTG CTCGACGACG ACAAGCACGT GCAGCCCGTC
TATGCGCCCA CGCCGATCAT CCGCGAGGCG GTGCTCAAAG CGCATCCGCA GATCGCCGAT
TATCTGAAGC CCGTGTTCGC GGGCCTCGAT CTGAAGACGC TGCAGACGCT CAACGCGCGG
ATACAGATCA ACGGCGAGCC GGCCGCGAGC GTCGCGGCGA GCTATCTGAA AGCGAAGGGC
TTCGTCAAAT GA
 
Protein sequence
MRSPKRLDAI IRDYSAPRVN APLFAKARPL KYLDPLPPAI GPASPPAECR LPGGRRPLHP 
LICCPTGVPA PMKVPRFSRS LRAAAAALAV SVCATAPGAH AAGAITVASK IDTEGNLLGN
VIAQVLKAHG IAVVDKIGLG ATPIVRKALT TGEIDIYPEY TGNAAFFFNK ADDPAWKNAA
QGYALARQLD YAANRIVWLA PAPANNTWGV AVLSSVAQAQ HLKTFSDFGR WVGAGGKVKL
AASAEFVNSA SALPSFEKVY GFKLKQEQML VLSGGDTAAT IKAAAQQTDG VNAAMVYGTD
GGIAAAGLTV LDDDKHVQPV YAPTPIIREA VLKAHPQIAD YLKPVFAGLD LKTLQTLNAR
IQINGEPAAS VAASYLKAKG FVK