| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I2283 |
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| Symbol | |
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| ID | 3847306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007651 |
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| Strand | + |
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| Start bp | 2571887 |
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| End bp | 2573242 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637841952 |
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| Product | sigma-54 dependent transcriptional regulator |
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| Protein accession | YP_442804 |
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| Protein GI | 83718770 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.884804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCAGC ACGACGTCAT CCCGATCGTT CCCGTTTCGC CGCCCGACGT GGGCGTGCTC
GTGTCGTACC TCGAACAGGA CCCGCAACCG ATGATCGTGC TCGATCCGTC GTACCGAATC
CTCGCCGCGA ACGCCGCGTA TCAGCGGCAG TTCGGGATTG CCGGCGAGGC GCACGTCGGG
CGGCGCTGCT ATCAGGTCTC GCATCATTAC GACGTGCCGT GCGATCAGGC GGGCGAGCAT
TGCCCGATGA AGCAGGCGAC CGAATCGCGC AGCCTGAACC GCGTGCTGCA CATCCATCAC
ACGCCGCGCG GGCCCGAGCA CGTCGACGTC GAGCTGCGGC CGATCTTCGA CGCGCACGGT
GCGGTGATCG CGTACGTCGA GCGGCTGACG ACCGTGCGCA GCGCGTCGGC CAAGCCGAGC
GGCGAGGGGC TCGTCGGCGG CTCGGATGCG TTCAACGCGG CCCTGTCCGC GCTGCAGCGG
GTTGCACCTT CGACGCTGCC CGTGCTGCTG CTCGGCGAAT CGGGCACGGG CAAGGAATTG
TTCGCGCGCG CCCTGCACGA GGCGAGCGCG CGCGCGATGG GGCCGTTCGT CGTGGTCGAT
TGCTCGGGGA TCGCCGAGAC GCTGTTCGAG AGCGAACTGT TCGGCTACGA GAAGGGCGCG
TTCACCGGTG CGACCGCGCG CAAGCCCGGC CTCGTGGAGA CCGCGCAGGG CGGCACGCTG
TTTCTCGACG AGATCGGCGA CGTGCCGCTG TCGATGCAGG TGAAGCTGCT GCGCCTCATC
GAATCGGGGA CATTCCGGCG AGTGGGCGGC GTCGAGGTGC TGCGCGCGGA TTTCCGGCTC
GTCGCGGCGA CTCACAAGCC GCTGAAGGCG ATGATCGGCG ATGGGCGGTT CCGGCCGGAT
CTGTACTACC GGATCAGCGC GTACCCGATT GCGCTGCCTG CGGTGCGCGA GCGGCCGGGC
GACATGCCGC TTCTCGTCGA TTCGATCCTG CGCCGGATCG CGGCGCTCGG GCCGGCTGCC
GGGCAGCGCT TCACCGTCGC GCCCGATGCG CTCGCGCGGC TCGAGGCGTA CGCGTGGCCG
GGCAACATCC GCGAACTGCG CAACGTGCTC GATCGCGCAT GCCTGCTCAC GGACGACGGC
GTGATCCGCG TCGAGCACCT GCCCGACGAG GTCGCGCGCG CGGGCGACGC GCGCGAGGAG
GCGGGCGCGT CGGCGAAGCT GTCGGACGAC GAGCTCGCGC GGATTGCCCG CGCGTTCGTT
GGCACGCGGC GCGCGCTCGC CGGGCGAGTC GGGATGAGCG AGCGCACGCT GTACCGGCGG
CTGCGCGCGC TCGGGATCGC GACGCGGGAC GCTTGA
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| Protein sequence | MDQHDVIPIV PVSPPDVGVL VSYLEQDPQP MIVLDPSYRI LAANAAYQRQ FGIAGEAHVG
RRCYQVSHHY DVPCDQAGEH CPMKQATESR SLNRVLHIHH TPRGPEHVDV ELRPIFDAHG
AVIAYVERLT TVRSASAKPS GEGLVGGSDA FNAALSALQR VAPSTLPVLL LGESGTGKEL
FARALHEASA RAMGPFVVVD CSGIAETLFE SELFGYEKGA FTGATARKPG LVETAQGGTL
FLDEIGDVPL SMQVKLLRLI ESGTFRRVGG VEVLRADFRL VAATHKPLKA MIGDGRFRPD
LYYRISAYPI ALPAVRERPG DMPLLVDSIL RRIAALGPAA GQRFTVAPDA LARLEAYAWP
GNIRELRNVL DRACLLTDDG VIRVEHLPDE VARAGDAREE AGASAKLSDD ELARIARAFV
GTRRALAGRV GMSERTLYRR LRALGIATRD A
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