| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I2226 |
|---|
| Symbol | |
|---|
| ID | 3848522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | + |
|---|
| Start bp | 2502746 |
|---|
| End bp | 2503837 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637841895 |
|---|
| Product | RNA polymerase sigma factor RpoS |
|---|
| Protein accession | YP_442747 |
|---|
| Protein GI | 83721572 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
|---|
| TIGRFAM ID | [TIGR02394] RNA polymerase sigma factor RpoS
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAAAT CGAAGCGCCA CGATCCGCAA GCCGAGTCTG AGAAGCTCAG TCGAGCCACG
CAAGCATCGG TGGAGCGAAC GGGTGCTTCG ACGGACGAGG ACGAAGACGC TGCCGACAGC
GAACGCGACT ACGAGCCGCG CGAAGCGGAT TCTGACGATT CGCCGGGCGA AGGGCGCGGC
GAGACGGCCG ACGCGTCGCC CGACCTGGAC GACTTCCGGG CGCTTCTGCA GGCGGAACTC
ACCGCCGACA CGATTCAGCA CTACCTGAAC CGCATCAGCG TGAAGCCGCT GTTGACGGTC
GAGGAAGAGC AGCGCTATTC GCGGCTCGCG AAGGCGGGAG AATTCGAGGC GCGGCAGGTG
ATGATCGAGC GCAACCTTCG GCTCGTCGTC AGCATCGCGA AAGGCTATCT GAATCGCGGC
GTGCCGCTTC TCGATCTGAT CGAAGAGGGC AATCTCGGGC TCATGCACGC AATCGAAAAA
TTCGATCCGA CGCGCGGCTT TCGTTTTTCG ACGTACGCGA CCTGGTGGAT TCGCCAGAGC
ATCGAGCGCG CGATCATGAA TCAGGCGCGC ACGGTGCGAC TGCCGGTGCA CGTGATCCGC
GAGTTGAACC AGGTGCTGCG CGCGAAGCGC CATCTCGAGA AGAACTCGCT GTCGACGGGC
GAGGCCGCCG AACGCCGCGA GGCGAGCATC GACGACATCG CGTATCTGAC CGGCAAGACG
GCAGAGGAGG TCACCGACAT CCTCGCGCTG AACGAGCACA CCGCATCGCT CGACGCGCCG
CTCGATCTCG ATCCGGCGAG CAGCCTGCTC GATCTTCTAC CCGACGACCA GAGCCAGTCG
CCCGACGCGG AGGTTCAGCA CCGCGAGTTG GAGACGCTCA CGCGCGCGTG GCTGTCGCGT
CTGTCCGACA AGCACCGTCA CGTGATCGAG CGGCGCTTCG GCCTCAACCA TATCGAACCC
GCGACGCTCG AGGAGCTTGC CGACGAGATG GGACTGACCC GCGAGCGGGT TCGTCAGATC
CAGCAGGAAG CGCTCGTGCG GCTCAAGCGG TTTTTCGCCT CCAACGGCGT GCGCAAGGAC
GCCGTTCTGT AA
|
|---|
| Protein sequence | MPKSKRHDPQ AESEKLSRAT QASVERTGAS TDEDEDAADS ERDYEPREAD SDDSPGEGRG
ETADASPDLD DFRALLQAEL TADTIQHYLN RISVKPLLTV EEEQRYSRLA KAGEFEARQV
MIERNLRLVV SIAKGYLNRG VPLLDLIEEG NLGLMHAIEK FDPTRGFRFS TYATWWIRQS
IERAIMNQAR TVRLPVHVIR ELNQVLRAKR HLEKNSLSTG EAAERREASI DDIAYLTGKT
AEEVTDILAL NEHTASLDAP LDLDPASSLL DLLPDDQSQS PDAEVQHREL ETLTRAWLSR
LSDKHRHVIE RRFGLNHIEP ATLEELADEM GLTRERVRQI QQEALVRLKR FFASNGVRKD
AVL
|
|---|
| |