| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I2140 |
|---|
| Symbol | |
|---|
| ID | 3847577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | - |
|---|
| Start bp | 2416942 |
|---|
| End bp | 2418507 |
|---|
| Gene Length | 1566 bp |
|---|
| Protein Length | 521 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637841809 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_442661 |
|---|
| Protein GI | 83719782 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0397] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0423999 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTTTT CCAGAACCGA GGCCGCACCG GCCGCCACTC TCCCCGATCT CGCCGCGACG
CTCGCCGCCC CGCGCGACGG CGCGTTCCTG CAACTCGGCG CCGCGTTCCT CACGCGGCAG
CCCGCCGCGC CGCTGCCCGC GCCGTACGTC GTCGGCTTCT CCGACGATGC GGCGCGCATG
CTCGGCCTCG ATCCCGCGCT GCGCGACGCG CCCGGCTTCG CCGGGCTGTT CTGCGGCAAC
CCGACGCGCG ACTGGCCGCA GGCATCACTG CCGTACGCGT CGGTTTACTC GGGCCACCAG
TTCGGCGTAT GGGCGGGCCA GCTCGGCGAC GGCCGCGCGC TCACGATCGG CGAGCTGGAA
CACGACGGCC GCCGCTACGA GCTGCAACTG AAGGGCGCGG GCCGCACGCC GTACTCGCGC
ATGGGCGACG GCCGCGCGGT GCTGCGCTCG TCGATTCGCG AATACCTCTG CTCCGAGGCG
ATGCACCACC TCGGCATCCC GACGACGCGC GCGCTCGCCG TGATCGGCTC GGATCAGCCG
GTGGTCCGCG AGGAAATCGA AACGTCGGCG GTCGTCACGC GCGTCGCCGA GAGCTTCGTG
CGCTTCGGCC ATTTCGAGCA CTTCTTCGCG AACGATCGTC CCGAGCAGTT GCGCGCGCTC
GCCGATCACG TGATCGACCG TTTCTATCCG GCATGCCGCG ACGCCGACGA CCCGTATCTC
GCGCTCCTCG CGGAAGCGAC GCGGCGCACC GCGGAGCTCG TCGCGCAATG GCAGGCGGTC
GGCTTCTGCC ACGGCGTGAT GAACACCGAC AACATGTCGA TCCTCGGCGT GACGATCGAC
TACGGCCCGT TCGGCTTCAT CGACGCGTTC GACGCGAAGC ACGTCTGCAA CCATTCGGAC
ACGCACGGCC GCTACGCGTA CCGGATGCAG CCGCGCATCG CGCACTGGAA CTGCTTCTGC
CTCGCACAGG CGCTGCTGCC GCTCATCGGT CTGCATCGCG ACGCGCCGAG CGAAGACGCG
CGCGCCGAGC GCGCGGTCGA GGACGCGCAC GCGGTGCTCG GGCGCTTTGC CGAGCAGTTC
GGCCCCGCGC TCGAGCGCGC GATGCGCGCG AAGCTCGGCC TCGAGCTCGA ACGCGAAGGC
GACGCGGCGC TCGCGAACCA GTTGCTCGAA ATCATGGATG CGAGCCGCGC CGATTTCACG
CTGACGTTCC GCCATCTCGC GCGCGTGTCG AAGCACGACG CGCGCGGCGA CGCGCCCGTG
CGCGATCTCT TCGTCGATCG CGACGCATTC GACCGCTGGG CGAACCTCTA CCGCGCGCGC
CTGTCGGAAG AAGCGCGCGA CGACGCGGCA CGCGCGGCCG CGATGAACCG CGCGAACCCG
AAATACGTGC TGCGCAACCA CCTCGCGGAA ACGGCAATCC GCCGCGCGAA GGAGAAGGAC
TTTTCAGAAG TCGAGCGTCT CGCGGCCGTG CTGCGGCGCC CGTTCGACGA GCAGCCGGAG
CACGACGCGT ACGCGGCGCT GCCGCCCGAC TGGGCGAGCA CGCTCGAAGT GAGCTGCTCG
TCGTGA
|
|---|
| Protein sequence | MSFSRTEAAP AATLPDLAAT LAAPRDGAFL QLGAAFLTRQ PAAPLPAPYV VGFSDDAARM
LGLDPALRDA PGFAGLFCGN PTRDWPQASL PYASVYSGHQ FGVWAGQLGD GRALTIGELE
HDGRRYELQL KGAGRTPYSR MGDGRAVLRS SIREYLCSEA MHHLGIPTTR ALAVIGSDQP
VVREEIETSA VVTRVAESFV RFGHFEHFFA NDRPEQLRAL ADHVIDRFYP ACRDADDPYL
ALLAEATRRT AELVAQWQAV GFCHGVMNTD NMSILGVTID YGPFGFIDAF DAKHVCNHSD
THGRYAYRMQ PRIAHWNCFC LAQALLPLIG LHRDAPSEDA RAERAVEDAH AVLGRFAEQF
GPALERAMRA KLGLELEREG DAALANQLLE IMDASRADFT LTFRHLARVS KHDARGDAPV
RDLFVDRDAF DRWANLYRAR LSEEARDDAA RAAAMNRANP KYVLRNHLAE TAIRRAKEKD
FSEVERLAAV LRRPFDEQPE HDAYAALPPD WASTLEVSCS S
|
|---|
| |