Gene BTH_I2111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_I2111 
Symbol 
ID3847592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007651 
Strand
Start bp2382845 
End bp2383867 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content69% 
IMG OID637841780 
Producthistone deacetylase family protein 
Protein accessionYP_442634 
Protein GI83719797 
COG category[B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGCCGC CGTCGAGCGC GGGCTACGCG GAATCGCCCG ACTCGAAACG ACGCCTGCTG 
TCGCTCGTGT ACGCATCGGG GCTCGCCGCG AGGCTCGACA TGTCGAGCGC GCCCGCCGCG
ACCGACGACG ATCTGCTGCG CATCCATCCC GCGCATTACC TCGAAGCGTT CAAGCGCGCA
AGCGACACGG GCGGCGGCGA CCTCGGCGAA CTCGCGCCGT TCGGCCGGGG CAGCTATGAG
ATCGCGGCGC TGTCGGCGGG GCTCGCGCTG GCCGCCGTCG ACGCGGTGCT CGCCGAGCGC
GCAGCGAACG CGTTCTCGCT GTCGCGCCCG CCCGGCCATC ACTGCCTGCG CGACAAGCCG
ATGGGCTTTT GCCTGCTCGC GAACATTCCG ATCGCGATCG AGGCCGCGCG CGCGAAGCAT
CGCGTCGAGC GCGTCGCGGT GATCGACTGG GACGTGCATC ACGGCAACGG CACGCAGGCG
ATCTACTACG ACGACGCCGA CACGCTGACG ATCTCGCTGC ATCAGGACCG CTGCTTTCCG
CCCGGCTACA GCGGCGCCGA CGAGCGCGGC GCGGGCGCGG GCATCGGTGC GAACATCAAC
GTTCCGCTCC TCGCGGGCGC GGGCGACGAT GCATATCGAT ATGCATTCGA GCGGATCGTG
CTGCCCGCGC TCGACGCGTT CAGGCCGGAG CTCGTCGTCG TCGCGAGCGG ACTCGACGCG
AATGCGGTCG ACCCGCTCGC GCGGATGCAA CTGCACAGCG ACAGCTATCG ATTCATGACG
CACGCGCTGA AAGCAGCCGC GCAGCGGCAC TGCGCGGGGC GGCTCGTCGT CGTGCACGAA
GGCGGTTATT CGGAGGCCTA CGTACCGTTT TGCGGACAGG CGATCGTCGA GGCGCTGTCC
GGCATGCGCA CCGACGTCGT CGACCCGATG CTCGAACTCG CGATCGCGCA GCAGCCCGGC
GAGCGATTCA ACGCGTTCCA GCGGCAGTTG ATCGACGAAA TGGCGACGGG CTTCGGCTAT
TGA
 
Protein sequence
MQPPSSAGYA ESPDSKRRLL SLVYASGLAA RLDMSSAPAA TDDDLLRIHP AHYLEAFKRA 
SDTGGGDLGE LAPFGRGSYE IAALSAGLAL AAVDAVLAER AANAFSLSRP PGHHCLRDKP
MGFCLLANIP IAIEAARAKH RVERVAVIDW DVHHGNGTQA IYYDDADTLT ISLHQDRCFP
PGYSGADERG AGAGIGANIN VPLLAGAGDD AYRYAFERIV LPALDAFRPE LVVVASGLDA
NAVDPLARMQ LHSDSYRFMT HALKAAAQRH CAGRLVVVHE GGYSEAYVPF CGQAIVEALS
GMRTDVVDPM LELAIAQQPG ERFNAFQRQL IDEMATGFGY