Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_I2090 |
Symbol | ispF |
ID | 3847250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007651 |
Strand | + |
Start bp | 2368381 |
End bp | 2368869 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637841759 |
Product | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
Protein accession | YP_442614 |
Protein GI | 83718714 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTCA GAATCGGACA AGGCTACGAC GTGCACCAGC TCGTTCCCGG ACGGCCGCTC ATCATCGGCG GCGTGACGAT CCCGTACGAG CGGGGGCTTC TCGGCCACTC GGATGCGGAC GTGCTGCTGC ACGCGATCAC CGACGCGCTG TTCGGCGCGG CGGCGCTCGG CGACATCGGC CGACATTTCT CCGACACCGA TCCGCGCTTC AAGGGCGCCG ACAGCCGCGC GCTCTTGCGC GAATGCGCGG CGCGCGTCGC GCAGGCGGGC TTTTCGATCC GCAACGTCGA CAGCACGATC ATCGCGCAGG CGCCGAAGCT CGCGCCGCAC ATCGACGCGA TGCGCGCGAA CATCGCGGCC GATCTCGGCT TGCCGCTCGA TCGCGTGAAC GTGAAGGCGA AGACGAACGA GAAGCTCGGC TATCTGGGCC GCGGCGAGGG GATCGAGGCG CAGGCGGCGG CGCTCGTCGT GCGCGAAGCG GCCGCGTGA
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Protein sequence | MDFRIGQGYD VHQLVPGRPL IIGGVTIPYE RGLLGHSDAD VLLHAITDAL FGAAALGDIG RHFSDTDPRF KGADSRALLR ECAARVAQAG FSIRNVDSTI IAQAPKLAPH IDAMRANIAA DLGLPLDRVN VKAKTNEKLG YLGRGEGIEA QAAALVVREA AA
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