| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I2088 |
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| Symbol | |
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| ID | 3849829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007651 |
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| Strand | - |
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| Start bp | 2364040 |
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| End bp | 2367693 |
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| Gene Length | 3654 bp |
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| Protein Length | 1217 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637841757 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_442612 |
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| Protein GI | 83720153 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGAGCC GGAGCGGCTG CCGGTGCCGG CGCACGGAAT CAGGGCGAAG AGTCGGGAGG
TCACGGAAAG GAAACGCCGG GAAGATGAAA TCGAAAGACG GATTTTATAA TACGTCTTTC
GCCGTGATGA GCCGCGCCAC GCTCGTCCGC CATCCGGCGC TCGCCAACCA GCCGCTCGTT
ATGTCAGACA ACGCCTCCCC TTCGCAGTCC CCCGTCGCGC TCGTCAAGGC GGGCCAGCGC
TTCGCGTTCG ACGGAGCGCA CGGCTCCGCC GACGCGCTCG TCATCGCCCG CTATCTCGCC
GCGCACCGCG CGCAGGTGCC GCTTCTCGCC GTGATCTGCG CGAACGCGGT CGACGCGCAG
CGGCTCGCGC AGGAACTGCG CTACTTCGCG CCCGACGCGC GCGTGCGCGT GCTGCCCGAC
TGGGAGACGC TGCCGTACGA CACGTTCTCG CCGCACCAGG ATCTCGTGTC CGAGCGTCTC
GCGACGCTGC ACGACCTCGG CGAAGGCCGC TGCGACATCC TGCTCGTGCC CGCGACGACG
GCGCTCTACC GGATGCCGCC CGCATCGTTC CTCGCCGCGT ACACGTTCGC GTTCACGCAG
GGCGAGCGGC TCGACGAGGC GAAGCTGAAG GCGCAATTGA CGCTCGCCGG CTACGAGCAC
GTGAGCCAGG TCGTGCGTCC CGGCGAATAC TGCGTGCGCG GCTCGCTGAT CGACCTGTTC
CCGATGGGCT CGCCGCTGCC GTACCGGATC GACCTGTTCG ACGACCAGGT CGACTCGATC
CGCGCGTTCG ATCCGGACAC GCAGCGCAGC CTCTACCCGG TGCGAGACGT GCGCCTGCTG
CCCGGCCGCG AGTTCCCGTT CGACGAGGCG GCGCGCACCG CGTTCAGAAG CCGCTGGCGC
GAGACGTTCG AGGGCGACCC GAGCCGCGCG CCGATCTACA AGGACATCGG CAACGGCGTG
CCGTCGGCCG GCATCGAATA CTATCTGCCG CTCTTCTTCG ACGAGACGGC GACGCTGTTC
CACTACCTGC CCGAGAACGC GCAGCTCGTG TTCACGGGCG ACCTCGACGC GGCGATCAAG
CGCTTCACGG CCGACACGAA GCAGCGCTAC GCGTTCCTGT CGCACGATCG CGAGCGGCCG
ATCCTCGAGC CGCAGCGCCT GTTCCTGTCC GACGACGATT TCTATCTGCT CGCGAAGCCG
TTCGCACGGA TCGTGCTGCC CGCGCAGCCG TCGGGCGGCT GGGCCGCGCC GCTGCCGAAT
CTCGCGCTCG ACCGCCACGC GGACGCGCCG CTCGCCGCAT TCGCCGCGTA CCTGGAGACA
ACGAACAACC GCGTGCTCTT CACCGTCGAA TCGGCCGGCC GCCGCGAGAC GATCGCGCAG
CTGTTCGCCG AGCATCACCT GCGGCCCGCG GGCAGCGACA GCTTCGCCGC GTGGCTCGAG
ACCGACGAGC GCTTCGCACT CGGCGTAGCG CCCCTCGCAA GCGGCTTCGC GGTGCCGGGC
GAAGGCTACG CGATCGTCAC CGAGACCGAG CTGTACGGCG CGCTCGGCCG CCGCGCCGGA
CGCCGCCGCC AGGAACAGGC GAGCAACGTC GACGCGATGG TGCGCGACCT GTCCGAGCTG
AAGGTAGGCG ACCCGGTCGT CCATGCGCAG CACGGGATCG GCCGCTACAT GGGGCTCGTG
TCGATGGATC TCGGCGAAGG CGACACCGAG TTCCTGCATC TCGAATACGC GGGCGACAGC
AAGCTGTACG TGCCCGTCGC GCAACTGCAC GTGATCTCGC GCTACAGCGG CGCGGACCCG
GACAGCGCGC CGCTGCACGC GCTCGGCTCG GGCCAGTGGG AGCGCGCGAA GCGCCGCGCC
GCCCAGCAGA TCCGCGATAC CGCCGCCGAG CTGTTGAACC TCTATGCGCG GCGCGCGGCG
CGCGAGGGCC ACGCGTTCGC GCTCGATCCG CGCGACTACG TGAAGTTCGC CGACAGCTTC
GGCTTCGAGG AAACGCCCGA CCAGGCCGCG GCGATCGCGG CCGTGATCGG CGACATGACG
AGCGGCAAGC CGATGGACCG CCTCGTGTGC GGCGACGTCG GCTTCGGCAA GACCGAGGTC
GCGCTGCGCG CGGCGTTCAT CGCGGTGATG GGCGGCAAGC AGGTCGCGCT GCTGTCGCCG
ACGACGCTGC TCGCCGAGCA GCACACGCAG ACCTTCATCG ACCGCTTCGC CGACTGGCCC
GTGAAAATCG TCGAGCTGTC GCGCTTCAAG TCGACGAAGG AAGTGAACGC GGCGATCCAG
CAGATCAACG ACGGCAGCGT CGACATCGTG ATCGGCACGC ACAAGCTGCT GTCGTCGGAC
GTGCAGTTCA AGCGGCTCGG CCTCGTGATC ATCGACGAGG AGCACCGCTT CGGCGTGCGC
CAGAAGGAAG CGCTGAAGGC GCTGCGCGCG GAGGTGGACG TGCTCACGCT CACCGCGACG
CCGATCCCGC GCACGCTCGG CATGGCGCTC GAGGGCCTGC GCGACTTCTC GGTGATCGCG
ACCGCGCCGC AGAAGCGGCT CGCGATCAAG ACCTTCGTGC GCCGCGAGGA AGAAAGCGTG
ATCCGCGAGG CGATGCTGCG CGAGCTGAAG CGCGGCGGCC AGGTGTACTT CCTGCACAAC
GAGGTCGAGA CGATCGAGAA CCGCCGCGCG ATGCTCGAGG AACTGGTGCC CGAGGCGCGG
ATCGTGATCG CGCACGGCCA GATGCACGAG CGCGAACTCG AGCGCGTGAT GCGCGATTTC
GTCGCCCAGC GTGCGAACGT GCTGCTGTGC ACGACCATCA TCGAGACCGG CATCGACGTG
CCGAGCGCGA ACACCATCAT CATGCACCGC GCGGACAAGT TCGGTCTCGC GCAGTTGCAC
CAGTTGCGCG GCCGCGTCGG CCGCTCGCAC CATCAGGCGT ACGCGTACCT GCTCGTGCAC
GATCCGCAGG CGCTCACGAA GCAGGCGCAG CGGCGGCTCG AGGCGATCCA GCAGATGGAG
GAGCTCGGCT CGGGCTTCTA CCTCGCGATG CACGACCTCG AGATCCGCGG CACGGGCGAG
GTGCTCGGCG ACAAGCAGTC GGGCGAGATC CACGAGATCG GCTTCCAGCT CTACACCGAG
ATGCTGAACG ACGCGGTGAA GGCGTTGAAG AACGGCAAGG AGCCGGACCT CACCGCGCCG
CTCGCCGCGA CGACCGAGAT CAACCTGCAT GCGCCCGCGA TCCTGCCCGC CGATTACTGC
GGCGACGTGC AGGAACGGCT GTCGCTGTAC AAGCGGCTCG CGAACTGCGA GCACGGCGAT
GCGATCGACG GCATCCAGGA AGAGCTGATC GACCGCTTCG GCAAGCTGCC GCCGCAGGCG
CACGCGCTCG TCGAGACGCA CCGGCTGCGG CTCGCCGCGA AGCCGCTCGG CATCATGAAG
ATCGACGCGA GCGAGGCGGC GATCGGGCTG CAGTTCGTGC CGAATCCGCC GATCGATCCG
ATGCGGATCA TCGACATGGT GCAGAAGCAC CGGCACATCA AGCTCGCGGG CCAGGACAAG
CTGCGGATCG AGACGCGCAC GCCGGACCTC GCGGTGCGCG TGTCGACGGT GAAGGAAACG
CTGCGCGCGC TCGGTCAGCC TCAGCAGTCG CGCGCGCAGG CGGCGGCGCG GTAG
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| Protein sequence | MPSRSGCRCR RTESGRRVGR SRKGNAGKMK SKDGFYNTSF AVMSRATLVR HPALANQPLV
MSDNASPSQS PVALVKAGQR FAFDGAHGSA DALVIARYLA AHRAQVPLLA VICANAVDAQ
RLAQELRYFA PDARVRVLPD WETLPYDTFS PHQDLVSERL ATLHDLGEGR CDILLVPATT
ALYRMPPASF LAAYTFAFTQ GERLDEAKLK AQLTLAGYEH VSQVVRPGEY CVRGSLIDLF
PMGSPLPYRI DLFDDQVDSI RAFDPDTQRS LYPVRDVRLL PGREFPFDEA ARTAFRSRWR
ETFEGDPSRA PIYKDIGNGV PSAGIEYYLP LFFDETATLF HYLPENAQLV FTGDLDAAIK
RFTADTKQRY AFLSHDRERP ILEPQRLFLS DDDFYLLAKP FARIVLPAQP SGGWAAPLPN
LALDRHADAP LAAFAAYLET TNNRVLFTVE SAGRRETIAQ LFAEHHLRPA GSDSFAAWLE
TDERFALGVA PLASGFAVPG EGYAIVTETE LYGALGRRAG RRRQEQASNV DAMVRDLSEL
KVGDPVVHAQ HGIGRYMGLV SMDLGEGDTE FLHLEYAGDS KLYVPVAQLH VISRYSGADP
DSAPLHALGS GQWERAKRRA AQQIRDTAAE LLNLYARRAA REGHAFALDP RDYVKFADSF
GFEETPDQAA AIAAVIGDMT SGKPMDRLVC GDVGFGKTEV ALRAAFIAVM GGKQVALLSP
TTLLAEQHTQ TFIDRFADWP VKIVELSRFK STKEVNAAIQ QINDGSVDIV IGTHKLLSSD
VQFKRLGLVI IDEEHRFGVR QKEALKALRA EVDVLTLTAT PIPRTLGMAL EGLRDFSVIA
TAPQKRLAIK TFVRREEESV IREAMLRELK RGGQVYFLHN EVETIENRRA MLEELVPEAR
IVIAHGQMHE RELERVMRDF VAQRANVLLC TTIIETGIDV PSANTIIMHR ADKFGLAQLH
QLRGRVGRSH HQAYAYLLVH DPQALTKQAQ RRLEAIQQME ELGSGFYLAM HDLEIRGTGE
VLGDKQSGEI HEIGFQLYTE MLNDAVKALK NGKEPDLTAP LAATTEINLH APAILPADYC
GDVQERLSLY KRLANCEHGD AIDGIQEELI DRFGKLPPQA HALVETHRLR LAAKPLGIMK
IDASEAAIGL QFVPNPPIDP MRIIDMVQKH RHIKLAGQDK LRIETRTPDL AVRVSTVKET
LRALGQPQQS RAQAAAR
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