| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I2048 |
|---|
| Symbol | |
|---|
| ID | 3849125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | + |
|---|
| Start bp | 2322555 |
|---|
| End bp | 2323502 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637841717 |
|---|
| Product | SPFH domain-containing protein/band 7 family protein |
|---|
| Protein accession | YP_442572 |
|---|
| Protein GI | 83721006 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.010338 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTCGT TGATCGTCTG GGCGGTGCTG CTCGTCATCG CTTTCGTGAT CGTGTCGCAG
ACGGTGAAGA TCGTGCCGCA GCAACACGCA TGGGTGCTCG AGCGCTTCGG CCGCTATCAC
GCGACGCTGT CGCCCGGCCT GAACATCGTG CTGCCGTTCG TCGACCGGAT CGCATACCGG
CACGTGCTGA AGGAGATTCC GCTCGACGTG CCGAGCCAGA TCTGCATCAC GCGCGACAAC
ACTCAGTTGC AGGTCGACGG CGTGCTTTAC TTTCAAGTCA CCGATCCGAT GAAGGCGTCG
TACGGGTCGA GCAACTTCGT GCTCGCGATC ACGCAGCTCG CGCAGACCAC GCTGCGCTCC
GTGATCGGCA AGCTCGAGCT CGACAAGACG TTCGAGGAGC GCGATTTCAT CAATCACAGC
ATCGTGTCGG CGCTCGACGA GGCGGCCTCG AACTGGGGCG TGAAGGTGCT GCGCTACGAG
ATCAAGGATC TGACGCCGCC CAAGGAGATC CTGCACGCGA TGCAGGCGCA GATCACCGCG
GAGCGCGAGA AGCGCGCGCT GATCGCCGCG TCGGAAGGGC GCAAGCAGGA GCAGATCAAT
CTCGCGTCGG GCGCGCGCGA GGCGGCGATC CAGAAGTCCG AGGGCGAGAA GCAGGCGGCG
ATCAACCAGG CGCAGGGCGA GGCGGCCGCG ATTCTCGCGG TGGCCGAGGC GAACTCGCAG
GCGATTCAGA AGATCGCGCT GGCGATCCAG TCGCAGGGCG GGATGGACGC GGTGAACCTG
AAGGTGGCCG AGCAGTATGT CGGCGCGTTC GGCAACCTCG CGAAGACGGG CAATACGCTG
ATCGTGCCGT CGAACCTGTC GGATCTGAGC ACGGCGATCG CGTCGGCGCT GACGATCGTG
AACCGCAGCG CGCCGGGCGC GGCAGGCCCG GGCGTGAGCA AGGGCTGA
|
|---|
| Protein sequence | MDSLIVWAVL LVIAFVIVSQ TVKIVPQQHA WVLERFGRYH ATLSPGLNIV LPFVDRIAYR
HVLKEIPLDV PSQICITRDN TQLQVDGVLY FQVTDPMKAS YGSSNFVLAI TQLAQTTLRS
VIGKLELDKT FEERDFINHS IVSALDEAAS NWGVKVLRYE IKDLTPPKEI LHAMQAQITA
EREKRALIAA SEGRKQEQIN LASGAREAAI QKSEGEKQAA INQAQGEAAA ILAVAEANSQ
AIQKIALAIQ SQGGMDAVNL KVAEQYVGAF GNLAKTGNTL IVPSNLSDLS TAIASALTIV
NRSAPGAAGP GVSKG
|
|---|
| |