Gene BTH_I2023 details

Gene Information

• Locus tag: BTH_I2023
• Symbol: def-2
• ID: 3849858
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia thailandensis E264
• Kingdom: Bacteria
• Replicon accession: NC_007651
• Strand: +
• Start bp: 2292392
• End bp: 2292925
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637841692
• Product: peptide deformylase
• Protein accession: YP_442547
• Protein GI: 83719851
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 0.802716
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTCGCG AGATTCTGAA GATGGGCGAT CCGCGTCTGC TGGAAGTCGC CCGGCCGGTG 
GAGTCGTTCA ATACGCCGGA GTTGCACGCG CTCGTCGCGG ACATGTTCGA GACGATGCAT 
CACGCGAACG GCGCGGGACT CGCCGCGCCG CAAATCGGCG TCGGGCTGCA GGTGATCATC 
TTCGGCTTCG GCAGCAGCGA GCGCTACCCG GAGGCGCCGC CCGTGCCGGA GACCGTGCTA 
GTCAATCCGA GCGTCGAATA TCTGCCGCCC GACATGGAGG ACGGTTGGGA GGGCTGCCTG 
TCGGTGCCGG GGCTGCGCGG CGTCGTGAGC CGCTACCGGC GCGTGCGCTA CAGCGGCTTC 
GACCAGTACG GCGCGAAGCT CGAGCGGATC GCGGAGGGCT TTCATGCGCG GGTCGTCCAG 
CATGAGTACG ACCACCTGAT CGGCAAGCTC TATCCGATGC GGATCACCGA TTTCTCGAAG 
TTCGGCTTTA CCGACGTGCT GTTCCCGGGG CTCGACGCGC AAGCGGACGA TTGA 

 

Protein sequence

MIREILKMGD PRLLEVARPV ESFNTPELHA LVADMFETMH HANGAGLAAP QIGVGLQVII 
FGFGSSERYP EAPPVPETVL VNPSVEYLPP DMEDGWEGCL SVPGLRGVVS RYRRVRYSGF 
DQYGAKLERI AEGFHARVVQ HEYDHLIGKL YPMRITDFSK FGFTDVLFPG LDAQADD