| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I1950 |
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| Symbol | |
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| ID | 3847982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007651 |
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| Strand | - |
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| Start bp | 2198495 |
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| End bp | 2201641 |
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| Gene Length | 3147 bp |
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| Protein Length | 1048 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637841619 |
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| Product | AcrB/AcrD/AcrF family protein |
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| Protein accession | YP_442479 |
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| Protein GI | 83720314 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGA ACCTGTTCGC GGTGTTCATC CGCTACCCGG TCGCCACCTG CCTGATGACG
GCGGGCATCC TGTTCGCGGG CGTGGCCGCG TATTTCCATT TGCCCGTCGC GCCACTGCCG
CAGGTCGAGT TCCCGACCAT CCAGGTCTCG GCCGTGCTGC CCGGCGCCGA TCCGGTTTCG
GTCGCGTCGA CGCTCGCGCA GCCGCTCGAG ACGCAGTTCT CGAAGATACC GTACGTCACG
CAGATGACGT CGCAAAGCAC GCTCAGCTCG ACGTCGATCG TGCTGCAATT CAGTCTCGAT
CGCAGCATCG ACGCGGCCGC CAACGACGTG CAGTCCGCGA TCGACGCGGC GGCCGCGCAA
CTGCCGGCGG ACCTTCCCTC GCCGCCGACG TTCCAGAAGG TCAATCCGGC CGACTCGCCG
ATCATGCTGC TGAGCGCGAT ATCGCCGACA CTGCCGCTCA CGACGATCGA CGACTATGTC
GAGACGCGGC TGACGAAAAG CCTGAGCCAG ATCGACGGCG TCGGCAGCGT GTCGATCGGC
GGGCAACAGA AGCCGTCGAT CCGCATCCAG CTCGACCCGG TCAAGCTCGC GTCGCGCGGC
CTGTCGTCCG AGGAGGTGCG CCGCGCGCTG TCGGGCCTGT CGGGCGTGAA TCCGAAAGGC
GTGTTCAACG GCACGACGCG CTCGTACACG ATCTACACGA ACGGACAGCT GACCGATCCG
GCGCAGTGGA ACGACGCGAT CGTCGCGTAC CGGGACGGCA CGCCGGTGCG CATCCGGGAC
ATCGGGCAAG CGGTGCTCGG CCCCGAGGAC AACACGCTTG CCGCATGGAT CGACGGCAAG
CGCGCGATTT CGGTCGGCGT CTACAAGAAG CCCGGCGCGA ACACCGTCGA GACCGTCGAC
AAGATCCGCG CCAGGCTGCC CGAGCTCGAG GCGTCGCTGC CGCCGTCGCT GAAGATCGCC
GTGCTAGCGG ACCGCACGCA GACGATCCGC GCGTCGCTGC TCGACATCGA GCTCACGCTG
CTGCTGAACG TCGTGCTCGT CGTCGTCGTG ATCTACGCGT TTCTCGGCAG CGTGCGCACG
ACGATTATCC CGGCCGTCAC GGTGCCGGTC TCGCTGTTCG GCGCGTGCGC GCTGATGTGG
GTGTGCGGGT ACAGCCTCGA CAACATCTCG CTGATGGCGA TGACGATCGC GGTCGGCTTC
GTCGTCGACG ACGCGATCGT GATGGTCGAG AACATCGCGC GCCACGTCGA GGCGGGCGAG
CGGCCGCTGC AGGCGGCGCT CAAGGGGCTG AGCGAAACGA GCTTCACGAT CGCGTCGATC
AGCATCTCGC TCGTCGCGGT GCTGCTGCCG CTGTTGCTGA TGGGCGGCAT CATCGGCCGC
ATGTTCCGCG AGTTCGCCGT CACGCTGTCG ATGACGATTC TCGTGTCCGC ATTCGTCTCG
CTCACGCTCA CGCCGATGAT GGCGTCGTAC CTGCTGCGCG CGAATCGCCG CGACGACGGC
CGTGCGCCGC GCCCCGGGCT CTTCGAGCGC GCGTTCGCGC GGATGGCGGC CGCGTACGAG
CGCGCGCTCG ACGTCGCGCT GCGGCACCGT TTCGTCACGC TGTGCGCGTT CTTCGCGTCG
GTCGCGGCTT CCGTGTTCCT CTACGTCGGG ATTCCGAAAG GCTTCTTCCC GCAGCAGGAC
ACGGGCGTGA TCACCGGCGT TTCCGAAGCC GCACAGACCA TTTCCGTCGA GGACATGGCC
CGCCACTCGA TGGCACTCGC CGCGATCATC CGCGCCGACC CGGCCGTCGA GCATTGCCAG
ATGGCGGTGG GCGGCAGCGC GTATGCGGGC ACGACCGTGA ACAACGGCCG CTGGTACATC
ACGCTCAAGC CGCGCGATCA GCGCGACGCC ACCGCCGACG AGGTGATCCG CCGGCTGCGG
CCGCAATTCG CGAAAGTGCC CGGCGTGCGC ATGTACCTGC AGGCGGCGCA GGACGTGATC
ATCGGCGCGC GGCTCGCGCG CACCCAGTAC CAGCTGACGC TGCAAAGCGC CGACGTCGGC
GAGCTGACGA AGTGGGCGCC GCGCCTGCTC GCGCGGCTGT CCGTGCTACC GCAGCTGCGC
GACGTCGCGA GCGACCAGCA GGTGAACGGC TCGGCGCTCA GCGTCGCGAT CGACCGCGAT
CAGGCCGCGC GCTACGGCCT CACGCCCGAG GCGATCGACG GCACGCTGTA CGACGCGTTC
GGCTCGCGCC AGGTCGCGCA GTACTTCACG CAGTTGTCGA CCTACAAGGT CATCATGGAA
ACGCTGCCGT CGCTGCAGCG CGATCCGGGC ACGCTCGACA AGCTCTACAT GAAATCGCCG
TCGGGCGCGC TGGTGCCGCT GTCGTCGGTC GCGCGCTGGA CGACCGACAC GGTGCAGCCG
CTGTCGGTCA ATCACCAGTC GCTTTTCCCA TCGGTCACGA TCAGCTTCAA CCTCGCGCCC
GGCGTCTCGC TCGGCGAGGC CACGGCCGCC ATCGAGGCCG CGCAGGCCGC GCTGCGCATG
CCGCCCGCCG TCGTCGGGTC GTTCCAGGGC ACCGCGCAGG CATTCCAGAG CACGCTCGCG
ACGATGCCGA TGCTGATCCT GTCCGCGCTC GTCGTCGCGT ATCTGGTGCT CGGCGCGCTG
TACGGCAGCT TCATCCATCC GTGGACGATC CTGTCGACGC TCCCGTCGGC CGGCGTCGGC
GCGATCGCGA CGCTGTGGCT GTTCAAGTAC GACTTCAACC TGATCGCGCT GATCGGCGTG
ATTCTTCTCA TCGGCATCGT CAAGAAGAAC GGGATCATGA TGGTCGACTT CGCGATCGCC
GCGACGCGCG AGCAGAACAT GACGTCGTTC GACGCGATCC GCAGCGCGTG CCTGCTGCGC
TTCCGGCCGA TCATGATGAC GACGATGACC GCGCTCTTCG GCGCGCTGCC GCTCATGTTC
ACGCCCGGAA TGGGATCGGA GCTGCGGCAG CCGCTCGGCT ACGCGATGGT GGGCGGGCTT
CTGGTGAGCC AGGTGCTCAC GCTGTTGACG ACGCCCGTCA TCTATCTGTA TCTCGATACG
CTGTCGAGCC GCCTGAAGGC GCGCTTCAGG CCGCTCGGCC CCGACATGCC GTCGAACGCG
CATGTGGAGG GCGCGACCCA GGACTGA
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| Protein sequence | MSKNLFAVFI RYPVATCLMT AGILFAGVAA YFHLPVAPLP QVEFPTIQVS AVLPGADPVS
VASTLAQPLE TQFSKIPYVT QMTSQSTLSS TSIVLQFSLD RSIDAAANDV QSAIDAAAAQ
LPADLPSPPT FQKVNPADSP IMLLSAISPT LPLTTIDDYV ETRLTKSLSQ IDGVGSVSIG
GQQKPSIRIQ LDPVKLASRG LSSEEVRRAL SGLSGVNPKG VFNGTTRSYT IYTNGQLTDP
AQWNDAIVAY RDGTPVRIRD IGQAVLGPED NTLAAWIDGK RAISVGVYKK PGANTVETVD
KIRARLPELE ASLPPSLKIA VLADRTQTIR ASLLDIELTL LLNVVLVVVV IYAFLGSVRT
TIIPAVTVPV SLFGACALMW VCGYSLDNIS LMAMTIAVGF VVDDAIVMVE NIARHVEAGE
RPLQAALKGL SETSFTIASI SISLVAVLLP LLLMGGIIGR MFREFAVTLS MTILVSAFVS
LTLTPMMASY LLRANRRDDG RAPRPGLFER AFARMAAAYE RALDVALRHR FVTLCAFFAS
VAASVFLYVG IPKGFFPQQD TGVITGVSEA AQTISVEDMA RHSMALAAII RADPAVEHCQ
MAVGGSAYAG TTVNNGRWYI TLKPRDQRDA TADEVIRRLR PQFAKVPGVR MYLQAAQDVI
IGARLARTQY QLTLQSADVG ELTKWAPRLL ARLSVLPQLR DVASDQQVNG SALSVAIDRD
QAARYGLTPE AIDGTLYDAF GSRQVAQYFT QLSTYKVIME TLPSLQRDPG TLDKLYMKSP
SGALVPLSSV ARWTTDTVQP LSVNHQSLFP SVTISFNLAP GVSLGEATAA IEAAQAALRM
PPAVVGSFQG TAQAFQSTLA TMPMLILSAL VVAYLVLGAL YGSFIHPWTI LSTLPSAGVG
AIATLWLFKY DFNLIALIGV ILLIGIVKKN GIMMVDFAIA ATREQNMTSF DAIRSACLLR
FRPIMMTTMT ALFGALPLMF TPGMGSELRQ PLGYAMVGGL LVSQVLTLLT TPVIYLYLDT
LSSRLKARFR PLGPDMPSNA HVEGATQD
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