Gene BTH_I1838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_I1838 
SymbolhrpA 
ID3848029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007651 
Strand
Start bp2065457 
End bp2069599 
Gene Length4143 bp 
Protein Length1380 aa 
Translation table11 
GC content71% 
IMG OID637841507 
ProductATP-dependent helicase HrpA 
Protein accessionYP_442369 
Protein GI83720275 
COG category[L] Replication, recombination and repair 
COG ID[COG1643] HrpA-like helicases 
TIGRFAM ID[TIGR01967] ATP-dependent helicase HrpA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00763421 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAATG TACCTAAAAG TCCCGCGCAA AAACATGCGG GCACGCCGGG CGAGGCGCAG 
CCCGCCGGCG CGCACGCGCC GCGGCCGCCG CGCCCGCCGC GGGCGCCGTC CGGGCAGGCG
GGCGCGCCGC GCGCCGCGCG CCGCGACGCC GGCTCCGAGG CCGCGCGCGC GCCGCATGCG
CCGCGCGCGC GGACAGCGCC GAATCCCGTT CCGCCGATCA CGTTTCCCGA AAGCCTGCCC
GTGTCGGGCA AGCGCGACGA GATCGCGCGC GCGATCGCCG CTCACCAGGT CGTGATCGTC
TGCGGCGAGA CGGGCTCGGG CAAGACCACC CAGTTGCCGA AGATCTGCCT CGCGCTCGGC
CGCGGCGTCG GCGCGGGCGG CGCGGGGCTG ATCGGCCACA CGCAGCCGAG GCGGCTCGCG
GCGTCGTCGA CGGGCCGCCG GATCGCCGAG GAGCTCGGCA CGCCGTTCGG CGAAGTGGTG
GGCTACAAGG TGCGCTTCAC CGACAACCTC GCGCCGGGCG CGTCGGTCAA GCTGATGACG
GACGGCATCC TGCTCGCCGA GTCGCAGACC GATCCGCTGC TCAAGGCGTA CGACACCCTC
ATCATCGACG AGGCGCACGA GCGCAGCCTG AACATCGATT TTCTGCTCGG CTACCTGAAG
CAGATCCTGC CGAGGCGGCC GGACCTGAAG CTGATCGTCA CGTCGGCGAC GATCGACGCG
GACCGTTTCG CGCGCCATTT CGGCAGCGAC GAGCGGCCCG CGCCGGTGAT CGAGGTGAGC
GGGCGGCTCT ATCCGGTGGA AGTCCGCTAC CGGCCGATCG CCGACGACCG GCCGGCCGCC
GTCCGGCACG CGGAAGGCGC GGCGTCCGGG CGCGACCGCG CGAAGAGCGC GCGCGAGGCC
GAGCGCGACC TGATGGACGG CATCGTCGAC GCGGTCGACG AGCTGTGCCG CGAGGGCCCG
GGCGACGTGC TCGTGTTCCT GCCCGGCGAG CGCGAGATCC GCGACGCCGC CGAGTCGCTG
CGCAAGCACC ATCCGCCGCA CACCGAGATC CTGCCGCTGT TCGCGCGGCT GTCGGCGGCC
GAGCAGGAGC GCGTGTTCAA GGCGTCGAAC GCGCGGCGGA TCGTGCTCGC GACGAACGTC
GCCGAGACGT CGCTCACGGT GCCGGGCATC CGCTACGTCG TCGATACCGG GCTTGCGCGC
GTGAAGCGCT ATTCGTACCG GAACAAGGTC GAGCAGTTGC AGATCGAGTC GATCTCGCAG
GCGGCCGCGA ACCAGCGCGC GGGCCGCTGC GGCCGCGTCG CCGACGGCAT CTGCATCCGT
CTCTACGAGG AAAGCGATTT CGCCGGCCGC GCGCGCTTCA CCGATCCGGA AATCCTGCGC
TCGTCGCTCG CATCGGTGAT CCTGCGGATG AAGTCGCTGC ATCTGTCGGC GATCGAATCG
TTTCCGTTCA TCGAGCCGCC GCCCGGCCGC GCGATCGCGG ACGGCTATCA ACTGCTCAAC
GAGCTCGGCG CGGTCGACGA CGACAACGCG CTCACGCCGC TCGGCCGCGA GCTCGCGCGG
TTGCCGCTCG ATCCGCGCGT CGGCCGGATG ATCCTCGCCG CGCGCGACCA GCAGGCGTTG
CGCGAAGTGC TCGTGATCGC GAGCGCGCTG TCCGTGCAGG ACCCGCGCGA TCGCCCGATC
GACGCGCAGG AGCAGGCCGA CCAGGCGCAC CGGCGCTTCG CCGACGAGCG CTCCGAGTTC
CTCCAGTGGC TGAGGATCTG GGCGTGGTTC GAGGAGGCGG TCGCGCACAA GAAGTCGAAC
CGGCAACTCG TCGACGCGTG CCGGCAGCAT TTCCTGTCGC ACCTGCGGCT GCGCGAATGG
CGCGACGTCC ACTCGCAGCT CCTGACCGTC GTGCGCGAGC ACGGCTGGCG CCTGAACGAG
GCCGACGCGA CGTTCGAGCA GATCCATCTG TCGCTGTTGA CGGGGCTGCT CGGCAACATC
GGCTTCAAGG CCGAGGACGA GCCGCACTAT CTCGGCGCGC GCGGGATCAA GTTCCATCTG
TGGCCGGGCT CCGCGCTCGT GAAGAAGGCG GGGCGCTGGG TGATGGCGGC CGAGCTCGTC
GAGACGAGCC GCCTCTATGC GCGCTGCATC GCGAAGATCG AGCCGGAATG GATCGAGCGC
ATCGGCGCGC ACCTGTTGAA GAAATCGCTG TCCGAGCCGC ACTGGGAGAA GCGTCCCGCG
CAGGTCACCG CGTTCGAGCG CGCGACGCTG TACGGGCTCA CCGTCTATCA CCGGCGGCGC
GTCGCGTTCG GCCGGCAGGA CCCGGCGCGC GCGCGGGAGC TGTTCATCCG CGGCGCGCTC
GTCGACGGCG AATTCGACAC GAAGCTCGCG TTCTTCGCGC ACAACCGCAA GCTGCTCGCC
GACATCGAGC AGCTCGAGCA CAAGTCGCGC CGGCAGGACG TGCTCGTCGA CGACGAGCTG
ATTCACGCGT TCTACGATCA GGCGATTCCG TCCGGCATCC ACACGGGCGC CGCGTTCGAG
CGCTGGTACC GCGACGAGGT GAAAAAGAGC GGGCAGCCGG AAGACAAGCT GCGCCTGCTG
TATCTGTCGC GCGACGATCT GATGCGCCAC GAGGCGGCGG GCGTGACGAC CGATCTGTTT
CCGAAGCGCG CGACGATGGC GGGCGTCGAG ATGGCGCTCA CGTACCACTT CGAGCCCGGC
TCGCCGCGCG ACGGCGTGAC GCTCGCGGTG CCGCTCTTCG CGCTGAACCA GGTCGACGCG
CGCCGCGCCG AGTGGCTCGT GCCCGGGATG CTGAAGGAGA AGGCGCACCT GCTGCTGAAG
TCGCTGCCGC AGAAGCTGCG CCGCCATTGC GTGCCGCTGC CAGAGTACGC GGCGGGCTTC
GTCGAGCGCG CCGGGCGCGA GCGCTTCGGC GCGGGCGGCC TCGTCGACGC GCTGATCGCC
GACGTCCGCG AGCGGACGCA GGTCGCGACG AAGACGTCCG ACTTCAAGCT CGAGACGCTG
CCCGCGCACC TGTTCATGAA CTTCAAGGTG ATCGACGAGC ACGGCCGGCA GCTCGCGATG
GGGCGCAATC TCGCGCAGTT GCGCGCGGAG TTGGGCGCGC AGGCGCAGCA GCACTTTCAG
AAGATCGCCG CCGCGGCAAC GCTCGCGCCG GCGGGCGCGC CTTCCGGCGC GGCCGCCGCC
GAGGCGCCCG CGGGTGGCGC GCGGCCGCGA GGCGCGCAAG GCGGCGGGGC GACGCCCGCC
GTCGCGCCGT CGGCGGCGCA AGCGGGCGCG GCCGCCGCCG GCGCGACCGC GCTTTATGAG
AACCTGACGA CGTGGAACTT CGGCAAGCTG CCGGAACTCC TCGAGATCCG CCGGCGCGGC
GAGACGCTGT TCGGCTACCC GGCGCTCGTC GACCGCGGCA CGCACTGCGA CGTCGAGGTG
TTCGACTCGC CCGACGAGGC GGCGCGAATC CACCGCGCGG GCCTGCGGCG CCTGTTCGCG
TTGCAGCTGA AGGAGCCGAT CAAGTACCTG GAGAAGAACC TGCCGGGGCT GCGCGAGATG
GCGATGCAGT ACATGTCGCT CGGCACGCAG GACGAACTGC GCGACCAGTT GATCGCGACC
GCGCTCGACC GCGCGTGCCT GCAGGACCCG CTGCCCGCCG ACGACGCGAG TTTTCACGCG
CGCCGCGACG AGGGCAGGAG CCGGCTGAAC CTGCTCGCGC AGGAGATGGC GCGGCTCGTC
GGGCAGATCC TCGCCGAGTA CGCGGGGCTC GCGAAGAAGC TCGCGCAGGC GAAGCCGTTC
CCGGCCGCGC ACGCGGACCT GCAGGGCCAG CTCGCCGCGC TCGTCGGCAA GCGCTTCGTC
ATCGACACGC CTTACGCGCA GCTTGCGCAT TTCCCGCGCT ACCTGAAGGG CATCGCGCTG
CGAATCGACA AGCTGAAGGC CGATCCCGCC CGCGACGCGC GGCAGGCGGC CGAGCTGCAG
CCGCTCGCGC AGCATTATCA GCGCTCGATT GTGCAGCGCG GCGGCGTCGC GGATGCGCGG
CTCGCCGAGT TCCGGTGGCT GCTCGAGGAA CTGCGGATCT CGCTTTTCGC GCAGGAACTG
CGCACGCCGA TGCCGGTGTC GGTCAAGCGG CTCTACAAAG TGTGGGAGTC GATGCAGCGC
TGA
 
Protein sequence
MSNVPKSPAQ KHAGTPGEAQ PAGAHAPRPP RPPRAPSGQA GAPRAARRDA GSEAARAPHA 
PRARTAPNPV PPITFPESLP VSGKRDEIAR AIAAHQVVIV CGETGSGKTT QLPKICLALG
RGVGAGGAGL IGHTQPRRLA ASSTGRRIAE ELGTPFGEVV GYKVRFTDNL APGASVKLMT
DGILLAESQT DPLLKAYDTL IIDEAHERSL NIDFLLGYLK QILPRRPDLK LIVTSATIDA
DRFARHFGSD ERPAPVIEVS GRLYPVEVRY RPIADDRPAA VRHAEGAASG RDRAKSAREA
ERDLMDGIVD AVDELCREGP GDVLVFLPGE REIRDAAESL RKHHPPHTEI LPLFARLSAA
EQERVFKASN ARRIVLATNV AETSLTVPGI RYVVDTGLAR VKRYSYRNKV EQLQIESISQ
AAANQRAGRC GRVADGICIR LYEESDFAGR ARFTDPEILR SSLASVILRM KSLHLSAIES
FPFIEPPPGR AIADGYQLLN ELGAVDDDNA LTPLGRELAR LPLDPRVGRM ILAARDQQAL
REVLVIASAL SVQDPRDRPI DAQEQADQAH RRFADERSEF LQWLRIWAWF EEAVAHKKSN
RQLVDACRQH FLSHLRLREW RDVHSQLLTV VREHGWRLNE ADATFEQIHL SLLTGLLGNI
GFKAEDEPHY LGARGIKFHL WPGSALVKKA GRWVMAAELV ETSRLYARCI AKIEPEWIER
IGAHLLKKSL SEPHWEKRPA QVTAFERATL YGLTVYHRRR VAFGRQDPAR ARELFIRGAL
VDGEFDTKLA FFAHNRKLLA DIEQLEHKSR RQDVLVDDEL IHAFYDQAIP SGIHTGAAFE
RWYRDEVKKS GQPEDKLRLL YLSRDDLMRH EAAGVTTDLF PKRATMAGVE MALTYHFEPG
SPRDGVTLAV PLFALNQVDA RRAEWLVPGM LKEKAHLLLK SLPQKLRRHC VPLPEYAAGF
VERAGRERFG AGGLVDALIA DVRERTQVAT KTSDFKLETL PAHLFMNFKV IDEHGRQLAM
GRNLAQLRAE LGAQAQQHFQ KIAAAATLAP AGAPSGAAAA EAPAGGARPR GAQGGGATPA
VAPSAAQAGA AAAGATALYE NLTTWNFGKL PELLEIRRRG ETLFGYPALV DRGTHCDVEV
FDSPDEAARI HRAGLRRLFA LQLKEPIKYL EKNLPGLREM AMQYMSLGTQ DELRDQLIAT
ALDRACLQDP LPADDASFHA RRDEGRSRLN LLAQEMARLV GQILAEYAGL AKKLAQAKPF
PAAHADLQGQ LAALVGKRFV IDTPYAQLAH FPRYLKGIAL RIDKLKADPA RDARQAAELQ
PLAQHYQRSI VQRGGVADAR LAEFRWLLEE LRISLFAQEL RTPMPVSVKR LYKVWESMQR