Gene BTH_I1794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_I1794 
Symbol 
ID3848969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007651 
Strand
Start bp2008914 
End bp2010152 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content71% 
IMG OID637841463 
Productcysteine desulfurase SufS 
Protein accessionYP_442326 
Protein GI83720072 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID[TIGR01979] cysteine desulfurases, SufS subfamily 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.885674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGACA TGCTGCGTTC GACCACGATG GCGAGCGCCT TCCCGGCGCT CGCGCAGCGC 
GTGAACGGCG CGCCGCTCGC GTATCTCGAC AACGCGGCGA CGACGCACGT GCCGCAGCCC
GTTCTCGCCG CGATCCGCGG CTTCGACGAG CACGATCGCG CCAACATCCA CCGCGGCGTC
CACACGCTCA GCCAACGCGC CACCGATGCC TACGAGCGCT CGCGCGACAC GCTCGCGCGC
TTCGTCGGTG CAAGCGACGA TCACCTGCTC GTCTTCACGT CGGGCACGAC CGATTCGCTG
AATCTCGTCG CGCACGGGCT GTCGCTCGCG GGCCACACGC GATCCGTGCT GCGGGAAGGC
GACGAGATCG TCGTCAGCGC ACTCGAGCAT CACGCGAACC TCGTCCCGTG GCAGATGGCC
GCGCGTCGTT GCGGCGCGAC ACTGCGAATC CTGCATCCCG ATTCGCACGG CCGCCTGCAT
GTGCAGGATC TCGAACGATT GCTGACGCCG CGCACGCGCG TGTTCGCGGT CACGGCGTGC
TCGAACGCGA CGGGCGAGCG GCCGCCCTAC GAGGCGCTGC TCGCCGCCGC ACGGGCGGCC
GGCGCGCTGA CGGTGCTCGA CGCCGCTCAG GCGGTAGGCC ATGAAGTGCC GGACCTGTCA
AAGCTCGCGT GCGATTTCAT GGCGTTCTCC GGCCACAAGA TGTACGGGCC GATGGGAACG
GGCGCGCTCG TCGGCCGCCG GGACGCGCTC GAGCGGCTCG TCCCGCTGCG CTTCGGCGGC
GACATGGTGA GCTGGGTCGG CGAGACGGAC GCGACGTTCG CCGCGCTGCC CGCGCGGCTC
GAAGGCGGCA CGCCGAACGT CGCCGGCGCG GTCGGAATCG CGGCCGCCGC CGACTATATC
GACGCGATCG GCCGCACCCT GATCGATGCC CACGTGCGCG CGCTGCGCGA TCACGCCGCA
GCGGGTCTCG CGGCGCTCGA CGGCGTGACC GTGCTCGCGC CGCAGTCGCC TTCGGCGATC
GTGTCCTTCG TCGCCGACGA CGCGCATCCG CACGATATCG GCACATTACT CGACGAGCGC
GGCATCGCCG TGCGCACGGG TTTCCACTGC GCGCAGCCGC TTCTCGACAG GCTCGGCTGC
GGGCCGACGA CGCGCGCGTC GTTCGCGCTC TACAACACGC ACGACGAGGT CGAGCGCCTC
GTCGCGGGCG TCGCGCAAGC ATTGAAGGTA CTGAGATGA
 
Protein sequence
MGDMLRSTTM ASAFPALAQR VNGAPLAYLD NAATTHVPQP VLAAIRGFDE HDRANIHRGV 
HTLSQRATDA YERSRDTLAR FVGASDDHLL VFTSGTTDSL NLVAHGLSLA GHTRSVLREG
DEIVVSALEH HANLVPWQMA ARRCGATLRI LHPDSHGRLH VQDLERLLTP RTRVFAVTAC
SNATGERPPY EALLAAARAA GALTVLDAAQ AVGHEVPDLS KLACDFMAFS GHKMYGPMGT
GALVGRRDAL ERLVPLRFGG DMVSWVGETD ATFAALPARL EGGTPNVAGA VGIAAAADYI
DAIGRTLIDA HVRALRDHAA AGLAALDGVT VLAPQSPSAI VSFVADDAHP HDIGTLLDER
GIAVRTGFHC AQPLLDRLGC GPTTRASFAL YNTHDEVERL VAGVAQALKV LR