| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I1707 |
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| Symbol | |
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| ID | 3849809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007651 |
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| Strand | - |
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| Start bp | 1915474 |
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| End bp | 1918680 |
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| Gene Length | 3207 bp |
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| Protein Length | 1068 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637841376 |
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| Product | ribonuclease E |
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| Protein accession | YP_442242 |
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| Protein GI | 83719665 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000337375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGTTCA ATGCGACGCA GCAGGAAGAA CTGCGCGTCG CCATCGTCGA TGGGCAGAAG
CTCATCGACA TCGACATCGA AACCGCCGGC CGCGAACAAC GCAAAGGCAA CATCTACAAG
GGCGTCGTCA CCCGCATCGA ACCGTCGCTC GAAGCCTGCT TCGTCAACTA CGGCGAAGAC
CGCCACGGCT TCCTGCCGTT CAAGGAAGTC GCCCGCCAGT ACTTCAAGGA AGGCGTCGAC
ATGCGCTCCG CGCGCATCCA GGACGCGTTG CGCGAAGGCC AGGAGCTGAT CGTCCAGGTC
GAGAAGGAGG AGCGCGGCAA CAAGGGCGCG GCGCTCACCA CCTTCATCTC GCTCGCCGGC
CGCTATCTCG TGCTGATGCC GAACAACCCG CGCGGCGGCG GCGTGTCGCG CCGCATCGAG
GGCGACGAGC GCCAGGAACT GCGCGAGACG ATGGCGCAAC TGCAGATCCC CGACGGCATG
AGCATGATCG CCCGCACGGC GGGCATCGGC CGCAGCGCCG AGGAACTGCA GTGGGACCTG
AACTACCTGC TGCAGCTCTG GCGCGCGATC GAGGCGGCGT CGCAAAGCGG CCATCCCGGC
CAGCCGATGC TGATCTACCT CGAATCGAGC CTCGTGATCC GCGCGATCCG GGACTATTTC
CAGCCCGACA TCGGCGAAAT CCTGATCGAC ACGACCGAGA TCTACGATCA GGCCCGCGCG
TTCATGGACA TCGTGATGCC CGACAACGTC GGCAAGGTGA AGCGCTATCA CGACGACGTC
CCCCTCTTCT CGCGCTTCCA GATCGAGCAC CAGATCGAAA CCGCGTACTC GCGCACGGTG
CCGCTGCCGT CGGGCGGCGC GATCGTGATC GACCACACCG AGGCGCTCGT CGCGATCGAC
GTGAACTCGG CGCGCGCGAC CAAGGGCGCG GACATCGAGG AGACGGCGAC CCGCACGAAC
CTCGAGGCGG CCGATGAAGT GGCGCGCCAG CTGCGTCTGC GCGACCTCGG CGGCCTGATC
GTGATCGACT TCATCGACAT GGAGTCGGCC AAGAGCCAGC GCGAAGTCGA GCAGCGCCTG
AAGGACGCGC TCAAGCACGA CCGCGCGCGC GTGCAGATGG GCAAGATCTC GCGCTTCGGC
CTGATGGAGC TGTCGCGCCA GCGCCTGCGC CCGGCCCTGT CCGAAGGCAG CCACGTCACC
TGCCCGCGCT GCAACGGCAC GGGCCACATC CGCGACACCG AATCGTCCGC GCTGCAAGTG
CTGCGGATCA TTCAGGAAGA AGCGATGAAG GAGAACACCG CGGCGATCCA CTGCCAGGTG
CCCGTCGAGG TGACGGCCTT CCTGCTCAAC GAAAAGCGCC AGGAAATCAA CAAGATCGAG
TCGCGCTTCA AGGTCGGCGT CGTGCTGATC CCGAACAAGC ACCTCGATAC GCCGCACTAC
AAGCTCGAGC GCCTGCGTCA CGACGATGCG CGCCTCGACG ATCCGCGCGC ATCGTGGAAG
ATGGCCGAGG AAGCCGCCCG CGAGCTCGAG GCGGAAACCG GCTACAGCAA GCGCGCCGAG
GAAACGAAGC CGCGCCAGGA AGCGGCCGTC AAGGGCATCA CGCCCGAGCG TCCGGCGCCG
AGCCCCGCGC CGCAGCGCCA GAGCGCGCCG GAAGCGGCTG CGCCCGTGGC CGCCGCGCCC
GCGAGCGGCG GTTTCATGAA GTGGCTGAAG GGCCTGTTCG GCGTGCAGCC CGCCGCGGCG
CCCGCACCGG CGCCCGCCGC GCAGGAAGCG GCCGCGCGTC CGGCGCGCGA GCGTGGCGAA
CGCGGCGAGA AGGCCGAGCG CGGCGAACGC GGCGGCGATC GCAACCGCAA CCGTCGCGGC
GGCGCCGCGC AGCAAGCCGG CGGACGCGAT CAGGCAGCGG CAGGCGGCGG CCGCGGTCAG
GCGCAGCGCG CCGAGCGCGA AGGCAAGGAA ACCCGCGAGC CCCGCGAAGG CCGCGAAGCA
CGCGGCGGCC GGGACAACCG GGAAGGCCGC GAAGCACGCG AAGCACGCGA AACCCGCGAA
CCGCGCGAAC CGCGCGAACA ACGCGAGCCG CGCGAACCCC GTGAGCCGCG CGAACAGCGC
GAACCCCGCG AACGCGCCGA AACGGCCGAC GCCTCGGAAG CGCCGCGCGG CGAGCGCCGT
GAGCGCGGTG AGCGTCGCAA GCCGGCCCAG CACGTCGCGA CGCTCGAAAC CGTGAACCGC
GGCGAAAGCG CACTCGCGGA AGCCGCTGAA AAGCCGGCGT ACGCGCCTGG CGCGGAAGCC
GGCGTCGACG CGGATTCGAA CGCGCGTGAC GGCGAGGAAC GCCGCCGCCG CCGCCGCGGT
CGCCGTGGCG GCCGCCGCGA GCGCGAGGAC GAAGGCGCAG CGCACGCTGC GGAAGGCGGC
GAAGGCGTGA CGGTCGAAGC GTTCGAGCAT GCCGAGCAAG CGCAGCAAGG CGTCGCGCCT
GCCGCCGGCC ACGAGCCGCA GCATGTCGCG CAAGCGGGCG CGGGTGCGGC GGCAGTCGCG
GCTGCGGCCA TCGCCGCTGA TTCTGCCGCG CATGTCGAGA GCGGCGCGAA GGTCGAGCCG
CAACCGGCAG CCGGGGCGCC CGTCGCCGAC ACGCAGCGTG CCGAGGCGGC GCCTGCGCGA
CTGGTCGAAG CGCCGGCGCA AGCCGCTTCG ACGGCTCAAG CCGAAGTCGA GCAAGCCGCT
CCGGCAACCG CGGCGCACGT ACAGCCGGCT GCGGCCGATG TCGCGCACGA GCCCCCCGCT
CCGGCCGCAA CCGCCCCCGC CGAAGCCGCC CCGGCCGAAG CGCCTGCCGC GGAAGCGTCC
GAAGTCGCCG CACCCGCGGT CGCTCCGGCC GTGGTCGCGG AGCCTGCGCC GGTCGCCGAA
ACGCAGCAGC CCGCTGCTGT CGCGGCGGCC GCACCGCTCG CAGCGCCTGT CGCGCACGAG
CCGGCTCCCG TCGCCGAGAC GCACGTCCCG GCGGCCGCTC GAGCCGAGGC GGCCACTCCG
GCCTCCGTCT CGACCGCGGG CGCGAGCCTC GACACGGTGC TCGAAGCCGC CGGTCTCGTG
TGGGTCAACA CCGACACGGA CAAGCTGCGC GCCGCGCAGG CCGCCGCCGC GCAAATCGTG
CCGCCCGCGC GCGTGCCGCG CGAACGCAAG CCGTTGCCGC CCGTCGACGC GGCGCCGATG
CAGCAGGTCG AGACGACGCA CCGCTGA
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| Protein sequence | MLFNATQQEE LRVAIVDGQK LIDIDIETAG REQRKGNIYK GVVTRIEPSL EACFVNYGED
RHGFLPFKEV ARQYFKEGVD MRSARIQDAL REGQELIVQV EKEERGNKGA ALTTFISLAG
RYLVLMPNNP RGGGVSRRIE GDERQELRET MAQLQIPDGM SMIARTAGIG RSAEELQWDL
NYLLQLWRAI EAASQSGHPG QPMLIYLESS LVIRAIRDYF QPDIGEILID TTEIYDQARA
FMDIVMPDNV GKVKRYHDDV PLFSRFQIEH QIETAYSRTV PLPSGGAIVI DHTEALVAID
VNSARATKGA DIEETATRTN LEAADEVARQ LRLRDLGGLI VIDFIDMESA KSQREVEQRL
KDALKHDRAR VQMGKISRFG LMELSRQRLR PALSEGSHVT CPRCNGTGHI RDTESSALQV
LRIIQEEAMK ENTAAIHCQV PVEVTAFLLN EKRQEINKIE SRFKVGVVLI PNKHLDTPHY
KLERLRHDDA RLDDPRASWK MAEEAARELE AETGYSKRAE ETKPRQEAAV KGITPERPAP
SPAPQRQSAP EAAAPVAAAP ASGGFMKWLK GLFGVQPAAA PAPAPAAQEA AARPARERGE
RGEKAERGER GGDRNRNRRG GAAQQAGGRD QAAAGGGRGQ AQRAEREGKE TREPREGREA
RGGRDNREGR EAREARETRE PREPREQREP REPREPREQR EPRERAETAD ASEAPRGERR
ERGERRKPAQ HVATLETVNR GESALAEAAE KPAYAPGAEA GVDADSNARD GEERRRRRRG
RRGGRRERED EGAAHAAEGG EGVTVEAFEH AEQAQQGVAP AAGHEPQHVA QAGAGAAAVA
AAAIAADSAA HVESGAKVEP QPAAGAPVAD TQRAEAAPAR LVEAPAQAAS TAQAEVEQAA
PATAAHVQPA AADVAHEPPA PAATAPAEAA PAEAPAAEAS EVAAPAVAPA VVAEPAPVAE
TQQPAAVAAA APLAAPVAHE PAPVAETHVP AAARAEAATP ASVSTAGASL DTVLEAAGLV
WVNTDTDKLR AAQAAAAQIV PPARVPRERK PLPPVDAAPM QQVETTHR
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